Detailed information NTG0376471

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FQZ25_RS06345
• Genome accession: NZ_CP042270
• Coordinates: 1206930..1208057 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470745.1
• Uniprot ID: A0A9W5QA17
• Organism: Bacillus thuringiensis strain GA-A07
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1201930..1213057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQZ25_RS06315 (FQZ25_06320)	spoIIIJ	1201961..1202737 (-)	777	WP_017673752.1	YidC family membrane integrase SpoIIIJ	-
FQZ25_RS06320 (FQZ25_06325)	rnpA	1202790..1203137 (-)	348	WP_000726619.1	ribonuclease P protein component	-
FQZ25_RS06325 (FQZ25_06330)	rpmH	1203214..1203348 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
FQZ25_RS06330 (FQZ25_06335)	dnaA	1203913..1205253 (+)	1341	WP_000428017.1	chromosomal replication initiator protein DnaA	-
FQZ25_RS06335 (FQZ25_06340)	dnaN	1205432..1206577 (+)	1146	WP_001212884.1	DNA polymerase III subunit beta	-
FQZ25_RS06340 (FQZ25_06345)	yaaA	1206705..1206917 (+)	213	WP_000821364.1	S4 domain-containing protein YaaA	-
FQZ25_RS06345 (FQZ25_06350)	recF	1206930..1208057 (+)	1128	WP_000470745.1	DNA replication/repair protein RecF	Machinery gene
FQZ25_RS06350 (FQZ25_06355)	gyrB	1208096..1210018 (+)	1923	WP_000435982.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
FQZ25_RS06355 (FQZ25_06360)	gyrA	1210107..1212578 (+)	2472	WP_086391485.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43362.67 Da
• Isoelectric Point: 6.6001

>NTDB_id=376471 FQZ25_RS06345 WP_000470745.1 1206930..1208057(+) (recF) [Bacillus thuringiensis strain GA-A07]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRE

Nucleotide

• Length: 1128 bp

>NTDB_id=376471 FQZ25_RS06345 WP_000470745.1 1206930..1208057(+) (recF) [Bacillus thuringiensis strain GA-A07]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCGCAAGGGAAAACAAATTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAACTTATCCGCTGGGATGAAGATTTTGGTCAAATAAAAGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAGCAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTGTATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTAATTGA
GCATGGTGCGAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGAGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGACGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACTGCACTAT
CCCTAAAATTAGCTGAAATTGAATTGATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGTTGGATGATGTTTTATCA
GAATTAGATGATTATCGTCAATCACATCTTTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACTGTAGATTGTGAAATAGATA
GGGAATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.576	98.133	0.653