Detailed information NTG0376465

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: FQZ25_RS04785
• Genome accession: NZ_CP042270
• Coordinates: 878978..880327 (-)
• Length: 449 a.a.
• NCBI ID: WP_033696100.1
• Uniprot ID: -
• Organism: Bacillus thuringiensis strain GA-A07
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 873978..885327

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQZ25_RS04765 (FQZ25_04770)	secA	874303..876810 (-)	2508	WP_000579385.1	preprotein translocase subunit SecA	-
FQZ25_RS04770 (FQZ25_04775)	raiA	877085..877627 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
FQZ25_RS04775 (FQZ25_04780)	cspC	877950..878147 (-)	198	WP_001990088.1	cold shock protein CspC	-
FQZ25_RS04780 (FQZ25_04785)	-	878274..878978 (-)	705	WP_013142274.1	ComF family protein	-
FQZ25_RS04785 (FQZ25_04790)	comFA	878978..880327 (-)	1350	WP_033696100.1	ATP-dependent helicase ComFA	Machinery gene
FQZ25_RS04790 (FQZ25_04795)	-	880455..881882 (-)	1428	WP_152305079.1	C40 family peptidase	-
FQZ25_RS04795 (FQZ25_04800)	-	882031..882345 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
FQZ25_RS04800 (FQZ25_04805)	-	882518..883360 (-)	843	WP_000684725.1	DegV family protein	-
FQZ25_RS04805 (FQZ25_04810)	-	883597..884232 (+)	636	WP_000926669.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51189.01 Da
• Isoelectric Point: 9.8543

>NTDB_id=376465 FQZ25_RS04785 WP_033696100.1 878978..880327(-) (comFA) [Bacillus thuringiensis strain GA-A07]
MLAGKQLLLEEISSDLQRELNDLKKKGEVICVQGVKKKNSKYMCQRCGNVDWRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAERKREKNSNLLQWNGTLSTGQNLAVQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=376465 FQZ25_RS04785 WP_033696100.1 878978..880327(-) (comFA) [Bacillus thuringiensis strain GA-A07]
ATGCTAGCGGGGAAACAGTTGCTATTAGAAGAAATTTCTTCAGATTTACAGAGGGAATTAAATGATTTGAAAAAGAAGGG
AGAGGTCATATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGCGGAAATGTAGATTGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGTGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCATATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.131	98.441	0.503