Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | FQU71_RS18055 | Genome accession | NZ_CP042254 |
| Coordinates | 3956555..3957244 (-) | Length | 229 a.a. |
| NCBI ID | WP_003634235.1 | Uniprot ID | D3HMN1 |
| Organism | Legionella longbeachae strain B3526CHC | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3951555..3962244
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FQU71_RS18035 (FQU71_18035) | pyk | 3952305..3953723 (+) | 1419 | WP_150867434.1 | pyruvate kinase | - |
| FQU71_RS18045 (FQU71_18045) | - | 3954456..3955124 (+) | 669 | WP_003634238.1 | hypothetical protein | - |
| FQU71_RS18050 (FQU71_18050) | - | 3955245..3956363 (+) | 1119 | WP_003634237.1 | hypothetical protein | - |
| FQU71_RS18055 (FQU71_18055) | rocC | 3956555..3957244 (-) | 690 | WP_003634235.1 | ProQ/FinO family protein | Regulator |
| FQU71_RS18060 (FQU71_18060) | - | 3957536..3957751 (+) | 216 | WP_003634232.1 | hypothetical protein | - |
| FQU71_RS18065 (FQU71_18065) | dapB | 3957770..3958501 (+) | 732 | WP_150867435.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| FQU71_RS18070 (FQU71_18070) | - | 3958540..3961017 (-) | 2478 | WP_150867436.1 | oxidoreductase | - |
Sequence
Protein
Download Length: 229 a.a. Molecular weight: 25675.36 Da Isoelectric Point: 10.4497
>NTDB_id=376352 FQU71_RS18055 WP_003634235.1 3956555..3957244(-) (rocC) [Legionella longbeachae strain B3526CHC]
MRKQELHPRTAVINKAQKNKSKKARTDALLWLAANFPAAFDNSLRIRPLKIGIMDDILLHAEKAAEVGISKSKLREAVVL
FTRRLDYLACLKLREMRIDLQGNDVGEVSSEEAEYAAAKIKKRVEKSARNARKALADKTANPSNPNPQGMSYHSKIMNQS
SNTTDDNFPVYPTRSTYNALNATTQPVRTTAVVVKHKSAKQYDPDAVARLKEKLGLSRNSEEKKETVEE
MRKQELHPRTAVINKAQKNKSKKARTDALLWLAANFPAAFDNSLRIRPLKIGIMDDILLHAEKAAEVGISKSKLREAVVL
FTRRLDYLACLKLREMRIDLQGNDVGEVSSEEAEYAAAKIKKRVEKSARNARKALADKTANPSNPNPQGMSYHSKIMNQS
SNTTDDNFPVYPTRSTYNALNATTQPVRTTAVVVKHKSAKQYDPDAVARLKEKLGLSRNSEEKKETVEE
Nucleotide
Download Length: 690 bp
>NTDB_id=376352 FQU71_RS18055 WP_003634235.1 3956555..3957244(-) (rocC) [Legionella longbeachae strain B3526CHC]
ATGAGAAAACAGGAGCTGCACCCACGCACCGCTGTTATTAATAAAGCTCAAAAAAATAAGTCTAAAAAAGCACGGACAGA
TGCTTTATTATGGCTTGCTGCAAATTTTCCTGCAGCATTTGATAATTCACTACGAATTCGCCCATTAAAAATTGGTATTA
TGGATGATATTTTACTTCATGCAGAAAAAGCTGCGGAAGTTGGTATTTCCAAAAGCAAATTGAGAGAAGCAGTGGTGTTA
TTTACGCGCCGTCTAGATTATTTGGCCTGTCTTAAGCTTCGAGAAATGCGAATTGATTTGCAAGGTAATGACGTTGGTGA
AGTGAGCTCAGAGGAAGCTGAATATGCGGCTGCCAAGATTAAAAAGCGTGTTGAGAAAAGTGCTCGTAACGCGCGTAAAG
CGCTTGCAGACAAAACAGCTAATCCTTCTAATCCAAATCCTCAAGGCATGAGCTACCACTCAAAAATAATGAATCAATCA
TCAAACACAACGGATGATAATTTTCCTGTTTATCCCACACGATCTACCTATAATGCCCTAAATGCAACGACACAACCGGT
TAGAACTACTGCTGTAGTGGTAAAGCATAAGTCAGCAAAACAATATGATCCTGATGCTGTAGCTCGTTTGAAAGAGAAAT
TGGGATTGTCCCGAAATTCCGAAGAAAAAAAAGAAACTGTTGAAGAGTAA
ATGAGAAAACAGGAGCTGCACCCACGCACCGCTGTTATTAATAAAGCTCAAAAAAATAAGTCTAAAAAAGCACGGACAGA
TGCTTTATTATGGCTTGCTGCAAATTTTCCTGCAGCATTTGATAATTCACTACGAATTCGCCCATTAAAAATTGGTATTA
TGGATGATATTTTACTTCATGCAGAAAAAGCTGCGGAAGTTGGTATTTCCAAAAGCAAATTGAGAGAAGCAGTGGTGTTA
TTTACGCGCCGTCTAGATTATTTGGCCTGTCTTAAGCTTCGAGAAATGCGAATTGATTTGCAAGGTAATGACGTTGGTGA
AGTGAGCTCAGAGGAAGCTGAATATGCGGCTGCCAAGATTAAAAAGCGTGTTGAGAAAAGTGCTCGTAACGCGCGTAAAG
CGCTTGCAGACAAAACAGCTAATCCTTCTAATCCAAATCCTCAAGGCATGAGCTACCACTCAAAAATAATGAATCAATCA
TCAAACACAACGGATGATAATTTTCCTGTTTATCCCACACGATCTACCTATAATGCCCTAAATGCAACGACACAACCGGT
TAGAACTACTGCTGTAGTGGTAAAGCATAAGTCAGCAAAACAATATGATCCTGATGCTGTAGCTCGTTTGAAAGAGAAAT
TGGGATTGTCCCGAAATTCCGAAGAAAAAAAAGAAACTGTTGAAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
70 |
100 |
0.703 |