Detailed information    

insolico Bioinformatically predicted

Overview


Name   letS   Type   Regulator
Locus tag   FQU71_RS07990 Genome accession   NZ_CP042254
Coordinates   1657580..1660312 (-) Length   910 a.a.
NCBI ID   WP_191968229.1    Uniprot ID   -
Organism   Legionella longbeachae strain B3526CHC     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1652580..1665312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQU71_RS07960 (FQU71_07960) - 1652724..1653260 (+) 537 Protein_1418 IS5 family transposase -
  FQU71_RS07970 (FQU71_07970) - 1653433..1654833 (-) 1401 WP_150866158.1 APC family permease -
  FQU71_RS07975 (FQU71_07975) - 1655163..1655486 (-) 324 WP_150866159.1 BolA family transcriptional regulator -
  FQU71_RS07980 (FQU71_07980) pilA2 1655568..1656002 (-) 435 WP_150866160.1 pilin Machinery gene
  FQU71_RS07985 (FQU71_07985) - 1656295..1657539 (-) 1245 WP_150866161.1 6-phosphofructokinase -
  FQU71_RS07990 (FQU71_07990) letS 1657580..1660312 (-) 2733 WP_191968229.1 two-component system sensor histidine kinase LetS Regulator
  FQU71_RS07995 (FQU71_07995) gltX 1660444..1661859 (+) 1416 WP_003632050.1 glutamate--tRNA ligase -
  FQU71_RS08000 (FQU71_08000) - 1661856..1663130 (+) 1275 WP_150866163.1 serine hydrolase -
  FQU71_RS08005 (FQU71_08005) - 1663270..1664253 (+) 984 WP_003632046.1 hypothetical protein -
  FQU71_RS08010 (FQU71_08010) gstA 1664312..1664914 (+) 603 WP_003632045.1 glutathione transferase GstA -

Sequence


Protein


Download         Length: 910 a.a.        Molecular weight: 102698.29 Da        Isoelectric Point: 7.7707

>NTDB_id=376338 FQU71_RS07990 WP_191968229.1 1657580..1660312(-) (letS) [Legionella longbeachae strain B3526CHC]
MKSIGIKYQLRITTLIPVFLVALLLAIFYNGLFGNDLKQHMSRLGEAYIRQLLPAAQYAMLRGDDRTLQGLINASTINPE
VKALAFYSSDGQLLAYRGGKHSLNKPFTAPKFTGDYIKSKQINPFTINFIAPVTIPKFNLYSNSSFKNILSPMASRADDI
LGWLSLDIDTRSMIIKRYQMLIVTIFITLFGLLVGLTIHYFLSKQIYLPISRLRRSMKQILRNEFETEIKTTSSGELGII
EQGCSHLQKKHLETIRDLNHHIEVATADLQQSLELLEEKNIELSLEKKKIEEKSRQKSEFIANMSHEIRTPMNGVIGFTN
VLLESKLDPLQLDYVKTIKSSAQDLLGIINDILDFSKIDAGKLHLDCIPLNIRHCIDEVLALAAPNAHKKGIDLIPITEL
NVPKIVLGDPFRVKQFISNLVTNAVKFTDHGYVLIRTNVEQETEKDYTLCITITDTGLGISPEDQSKLFTAFNQADTSIT
RRYGGSGLGLVICKKLCEEMKGRITFASELNKGSVFTAYIKVEKLVAYEVERNQVHPFAHFKMLCFDDNPMQLEALCNGL
GYWGIKCIAVSSLNQLAKELKDNKDCQIAFLNINKGYEQQITKLIAEHNYFPYVLISKWLINDYAALGAQGFLYKPISIQ
KLQDIIESLTNQENIEKSVNHELEGLREQLRFLHPDLLIAEDNPVNKMLLDSLLGTRSNITSVDNGEIAVSVCNEKKFSL
ILLDLRMPKINGLEAARLIRQKSEFNRHTPIVLISANGRDVNDIDLKKAGVNFCLQKPIDEKQLLIQILRIADKAKHSAI
DWQLCIQKASGNQSLAEEFLARFVEELLKNREEFIQLMHDKNVKQLGEVAHKLHGACCFSGVPTLQKKVVQVEKLAAHAA
SIEELAMPFAELIQSIDAVISEYENQKIKT

Nucleotide


Download         Length: 2733 bp        

>NTDB_id=376338 FQU71_RS07990 WP_191968229.1 1657580..1660312(-) (letS) [Legionella longbeachae strain B3526CHC]
TTGAAAAGCATTGGTATAAAGTATCAACTACGAATTACTACTTTAATTCCTGTTTTTCTCGTCGCCCTACTCCTTGCCAT
TTTTTATAATGGGTTGTTTGGTAATGACTTAAAACAACACATGTCTCGCCTTGGTGAAGCATATATCCGGCAATTACTTC
CGGCTGCCCAGTATGCTATGCTGCGTGGGGACGATCGAACCTTACAAGGCCTAATCAATGCCTCTACAATCAACCCCGAA
GTTAAAGCACTTGCTTTTTATAGTAGCGACGGTCAACTCCTTGCTTATCGTGGTGGCAAACATTCGCTTAACAAACCATT
TACTGCACCTAAATTCACTGGGGATTACATCAAAAGTAAACAAATTAACCCCTTTACTATTAATTTTATCGCGCCGGTTA
CGATTCCAAAATTCAATTTGTATTCCAATTCTTCTTTTAAAAATATTTTAAGTCCCATGGCATCCCGTGCTGATGACATT
CTTGGGTGGTTGTCTCTTGATATTGATACTCGTTCAATGATAATCAAACGTTATCAGATGCTTATTGTCACTATTTTCAT
TACTTTATTTGGGTTATTAGTAGGATTAACCATTCACTACTTTCTCTCCAAACAAATTTATTTACCTATTTCTCGTTTAC
GACGAAGCATGAAACAAATTTTGCGTAACGAGTTTGAAACAGAAATAAAAACAACAAGTTCTGGTGAATTAGGCATAATT
GAACAGGGATGTTCCCATTTGCAAAAAAAACACCTTGAAACGATACGTGATCTAAACCACCACATTGAGGTAGCCACGGC
TGATTTACAACAAAGTTTGGAACTCTTGGAAGAAAAAAATATTGAACTCTCCCTCGAAAAGAAAAAAATTGAAGAAAAAA
GTCGGCAAAAATCTGAGTTCATAGCCAATATGAGCCATGAAATTCGTACGCCGATGAATGGAGTTATTGGTTTTACTAAC
GTTTTGCTTGAAAGTAAACTCGATCCCTTACAACTGGATTATGTAAAAACAATTAAATCATCAGCACAAGACTTATTAGG
GATTATCAATGATATTCTCGATTTCTCAAAAATTGATGCAGGAAAACTTCATCTCGATTGTATTCCGTTAAATATTCGCC
ATTGTATTGATGAAGTACTCGCTCTTGCAGCACCTAATGCCCATAAGAAGGGAATCGACTTAATTCCTATAACAGAACTA
AACGTACCTAAAATTGTTTTAGGGGATCCCTTCAGGGTGAAACAATTCATTAGCAACCTGGTAACTAATGCTGTTAAATT
TACCGATCATGGATATGTATTAATCCGTACCAATGTGGAGCAGGAAACAGAAAAAGATTACACTTTATGCATTACAATTA
CTGATACAGGCCTAGGTATTTCTCCTGAAGACCAAAGCAAATTATTTACAGCCTTCAATCAAGCAGATACAAGTATTACC
CGTCGTTATGGGGGCTCCGGACTTGGCTTGGTAATTTGCAAAAAACTCTGCGAGGAAATGAAAGGCCGTATTACTTTCGC
CAGCGAACTCAACAAAGGTTCTGTATTTACCGCTTATATCAAGGTTGAAAAATTGGTTGCTTATGAAGTTGAAAGAAATC
AAGTGCATCCTTTTGCGCATTTCAAAATGCTTTGTTTTGACGATAACCCAATGCAATTGGAAGCCCTGTGTAATGGCTTA
GGATATTGGGGAATAAAATGTATCGCTGTAAGTTCACTCAATCAACTCGCGAAAGAGCTGAAAGACAATAAAGACTGCCA
AATCGCATTTCTTAATATCAATAAAGGCTACGAACAGCAAATTACCAAGCTAATAGCCGAACATAATTATTTTCCCTATG
TATTAATCTCTAAATGGCTTATCAATGATTATGCAGCACTTGGAGCACAGGGATTTTTATATAAACCCATTAGCATCCAA
AAACTCCAAGATATTATTGAGTCATTAACAAATCAGGAAAATATTGAAAAATCGGTTAACCATGAATTAGAAGGTTTAAG
GGAACAATTACGTTTCTTACATCCTGATCTTCTTATAGCTGAAGATAATCCAGTAAACAAAATGCTTCTTGATTCTTTAT
TAGGGACTCGTTCCAACATTACATCCGTTGATAATGGCGAAATAGCCGTATCGGTGTGTAATGAAAAGAAATTCAGTCTC
ATCTTGCTTGATTTGCGTATGCCTAAAATAAATGGCTTGGAGGCTGCTCGACTTATCCGCCAAAAATCAGAGTTTAATCG
TCATACACCAATAGTATTGATTAGTGCAAATGGTAGAGATGTTAATGATATTGATTTAAAGAAAGCTGGTGTAAATTTTT
GTTTGCAAAAACCTATAGACGAAAAACAATTATTAATTCAAATTTTACGTATTGCAGATAAAGCAAAACACTCAGCAATA
GATTGGCAGCTATGTATTCAAAAGGCATCAGGAAATCAATCACTTGCTGAAGAGTTTCTTGCTCGATTTGTAGAAGAATT
GCTTAAAAATCGTGAAGAGTTTATCCAATTAATGCATGATAAAAATGTGAAGCAACTGGGCGAAGTGGCGCATAAACTTC
ATGGAGCATGTTGTTTTAGTGGTGTTCCCACGTTACAAAAAAAAGTAGTTCAGGTTGAAAAACTTGCTGCGCATGCTGCT
TCAATCGAAGAGTTAGCTATGCCTTTCGCAGAATTAATTCAAAGCATCGATGCGGTGATTAGTGAATACGAAAATCAAAA
AATAAAAACTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letS Legionella pneumophila strain ERS1305867

77.925

99.56

0.776


Multiple sequence alignment