Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   FQB22_RS16280 Genome accession   NZ_CP042252
Coordinates   3175673..3176263 (+) Length   196 a.a.
NCBI ID   WP_003181328.1    Uniprot ID   A0A1Y0YEF8
Organism   Bacillus licheniformis strain KNU11     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3170673..3181263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQB22_RS16250 - 3170979..3171431 (+) 453 WP_369878864.1 flavodoxin -
  FQB22_RS16255 dapD 3171537..3172247 (+) 711 WP_003181319.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  FQB22_RS16260 - 3172316..3173440 (+) 1125 WP_003181321.1 N-acetyldiaminopimelate deacetylase -
  FQB22_RS16265 - 3173503..3173748 (+) 246 WP_003181323.1 YkuS family protein -
  FQB22_RS16270 ahpA 3174043..3174585 (+) 543 WP_003181325.1 biofilm-specific peroxidase AhpA -
  FQB22_RS16275 - 3174667..3175125 (+) 459 WP_003181327.1 TlpA family protein disulfide reductase -
  FQB22_RS16280 rok 3175673..3176263 (+) 591 WP_003181328.1 transcriptional regulator Rok Regulator
  FQB22_RS16285 - 3176409..3177365 (-) 957 WP_003181329.1 hypothetical protein -
  FQB22_RS16290 mobA 3177518..3178105 (+) 588 WP_016886580.1 molybdenum cofactor guanylyltransferase -
  FQB22_RS16295 - 3178211..3179224 (+) 1014 WP_025805761.1 molybdopterin-synthase adenylyltransferase MoeB -
  FQB22_RS16300 glp 3179244..3180536 (+) 1293 WP_003181335.1 gephyrin-like molybdotransferase Glp -
  FQB22_RS16305 mobB 3180503..3181030 (+) 528 WP_003181336.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 196 a.a.        Molecular weight: 22665.62 Da        Isoelectric Point: 9.9960

>NTDB_id=376301 FQB22_RS16280 WP_003181328.1 3175673..3176263(+) (rok) [Bacillus licheniformis strain KNU11]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
QQQPQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPN
MTTFMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 591 bp        

>NTDB_id=376301 FQB22_RS16280 WP_003181328.1 3175673..3176263(+) (rok) [Bacillus licheniformis strain KNU11]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTAGAGCAGCTGAACGAGGCTGAAGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAACATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCGGAGCGTAAAACTGAATCTCTCCCTGTTTTAGCTGAATTGGCTGCACAGGAGATGAAGAGCTACCAGCAACAGCAG
CAACAGCAGCCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGA
TGGAACGACAAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAATTGCGTGAAGCGGCGATTAAAACAT
TAAAACGCCATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAAT
ATGACAACCTTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGG
TGAGATTTCTACTGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YEF8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.77

97.449

0.816

Multiple sequence alignment