Detailed information NTG0376265

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: FQB22_RS05240
• Genome accession: NZ_CP042252
• Coordinates: 985706..986863 (-)
• Length: 385 a.a.
• NCBI ID: WP_003185733.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain KNU11
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 980706..991863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQB22_RS05210	-	980950..981369 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
FQB22_RS05215	comFC	981428..982162 (-)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
FQB22_RS05220	-	982119..982403 (-)	285	WP_003185718.1	late competence development ComFB family protein	-
FQB22_RS05225	comFA	982458..983852 (-)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
FQB22_RS05230	-	983973..984815 (-)	843	WP_003185726.1	DegV family protein	-
FQB22_RS05235	degU	984935..985624 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
FQB22_RS05240	degS	985706..986863 (-)	1158	WP_003185733.1	sensor histidine kinase	Regulator
FQB22_RS05245	-	987077..987715 (+)	639	WP_011198353.1	YigZ family protein	-
FQB22_RS05250	-	987730..988806 (+)	1077	WP_003185737.1	LCP family protein	-
FQB22_RS05255	-	988891..989265 (-)	375	WP_003185738.1	YunG family protein	-
FQB22_RS05260	-	989385..990449 (-)	1065	WP_003185739.1	glycosyltransferase family 4 protein	-
FQB22_RS05265	tuaH	990580..991761 (-)	1182	WP_011198354.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44636.36 Da
• Isoelectric Point: 6.7863

>NTDB_id=376265 FQB22_RS05240 WP_003185733.1 985706..986863(-) (degS) [Bacillus licheniformis strain KNU11]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=376265 FQB22_RS05240 WP_003185733.1 985706..986863(-) (degS) [Bacillus licheniformis strain KNU11]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATTCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894