Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FPZ51_RS01420 | Genome accession | NZ_CP042242 |
| Coordinates | 277462..278517 (-) | Length | 351 a.a. |
| NCBI ID | WP_005882714.1 | Uniprot ID | C3XCV6 |
| Organism | Oxalobacter formigenes strain SSYG-15 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 272462..283517
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPZ51_RS01390 (FPZ51_01390) | - | 272526..272996 (-) | 471 | WP_005882702.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| FPZ51_RS01395 (FPZ51_01395) | - | 272998..273759 (-) | 762 | WP_005882704.1 | phosphoribosyltransferase family protein | - |
| FPZ51_RS01400 (FPZ51_01400) | - | 273938..274714 (+) | 777 | WP_050757757.1 | methyltransferase domain-containing protein | - |
| FPZ51_RS01405 (FPZ51_01405) | rpoH | 274736..275635 (-) | 900 | WP_005882708.1 | RNA polymerase sigma factor RpoH | - |
| FPZ51_RS01410 (FPZ51_01410) | - | 275844..276773 (-) | 930 | WP_005882710.1 | ABC transporter permease | - |
| FPZ51_RS01415 (FPZ51_01415) | - | 276770..277450 (-) | 681 | WP_036604126.1 | cell division ATP-binding protein FtsE | - |
| FPZ51_RS01420 (FPZ51_01420) | pilA | 277462..278517 (-) | 1056 | WP_005882714.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| FPZ51_RS01425 (FPZ51_01425) | - | 278589..279932 (+) | 1344 | WP_005882717.1 | pitrilysin family protein | - |
| FPZ51_RS01430 (FPZ51_01430) | - | 279971..281320 (+) | 1350 | WP_005882719.1 | pitrilysin family protein | - |
| FPZ51_RS01435 (FPZ51_01435) | rsmD | 281357..281998 (+) | 642 | WP_050757806.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| FPZ51_RS01440 (FPZ51_01440) | coaD | 282037..282525 (+) | 489 | WP_005882724.1 | pantetheine-phosphate adenylyltransferase | - |
| FPZ51_RS01445 (FPZ51_01445) | - | 282585..282833 (+) | 249 | WP_005882726.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 37616.89 Da Isoelectric Point: 4.9325
>NTDB_id=376120 FPZ51_RS01420 WP_005882714.1 277462..278517(-) (pilA) [Oxalobacter formigenes strain SSYG-15]
MFSFFKKKTGDIPPEQDNSESSLADSSLTPHESSEVSPGNIDASSGIAKQDTEKKQSWLSRLKSGLAKTSANLNIFGGTT
IDEELFEELETALLVSDVGMPATEYLLDELRRKVKEEKLTQPSEIKTALAALLTDLLAPLQKNLEIGRHNPLVIMMAGVN
GAGKTTTIGKLAQHLQNNDQTVLLAAGDTFRAAAREQLAVWGDRNKITVIAQESGDPAAVAFDAVQSAKAKNINVVMVDT
AGRLPTQSHLMEELKKVKRVIGKGMDEAPHEIILVIDGNTGQNALAQVKAFDETLGLTGLIVTKLDGTPKGGILAAIAKN
HPVPVYFIGVGEKIDDLQPFVAEEFSNALLS
MFSFFKKKTGDIPPEQDNSESSLADSSLTPHESSEVSPGNIDASSGIAKQDTEKKQSWLSRLKSGLAKTSANLNIFGGTT
IDEELFEELETALLVSDVGMPATEYLLDELRRKVKEEKLTQPSEIKTALAALLTDLLAPLQKNLEIGRHNPLVIMMAGVN
GAGKTTTIGKLAQHLQNNDQTVLLAAGDTFRAAAREQLAVWGDRNKITVIAQESGDPAAVAFDAVQSAKAKNINVVMVDT
AGRLPTQSHLMEELKKVKRVIGKGMDEAPHEIILVIDGNTGQNALAQVKAFDETLGLTGLIVTKLDGTPKGGILAAIAKN
HPVPVYFIGVGEKIDDLQPFVAEEFSNALLS
Nucleotide
Download Length: 1056 bp
>NTDB_id=376120 FPZ51_RS01420 WP_005882714.1 277462..278517(-) (pilA) [Oxalobacter formigenes strain SSYG-15]
ATGTTTAGCTTCTTCAAAAAGAAAACCGGCGATATTCCGCCCGAACAGGATAACAGTGAATCCTCTTTGGCAGACTCGTC
ATTGACGCCACATGAGTCTTCTGAAGTCTCTCCCGGTAATATAGATGCATCTTCAGGCATTGCCAAGCAAGATACTGAAA
AAAAGCAATCCTGGCTGAGTCGCCTCAAAAGCGGGCTTGCCAAAACCTCGGCCAATCTGAATATTTTCGGTGGAACCACC
ATCGATGAAGAATTGTTCGAAGAACTGGAAACAGCTTTGCTCGTTTCAGATGTCGGAATGCCCGCCACGGAATATCTTCT
TGACGAACTTCGCCGGAAAGTGAAAGAAGAAAAGCTGACGCAGCCTTCTGAAATCAAGACGGCACTTGCCGCTTTATTGA
CCGATCTGCTGGCTCCCTTGCAAAAAAACCTCGAAATCGGCCGCCATAACCCTCTGGTTATCATGATGGCCGGTGTGAAT
GGCGCAGGTAAAACAACGACCATCGGCAAACTGGCGCAGCACCTGCAAAACAACGATCAGACCGTCCTTCTGGCAGCCGG
TGACACTTTCCGTGCTGCCGCACGGGAACAGCTTGCCGTCTGGGGCGACCGGAATAAAATTACCGTCATCGCGCAGGAAT
CCGGCGATCCGGCTGCCGTCGCTTTCGACGCCGTTCAGTCAGCAAAAGCAAAAAACATCAACGTCGTCATGGTCGACACG
GCAGGCAGGTTGCCGACGCAATCGCATTTGATGGAAGAACTTAAAAAGGTAAAACGGGTCATTGGTAAAGGGATGGATGA
AGCGCCACACGAAATCATCCTTGTCATCGATGGAAACACGGGGCAAAACGCACTGGCACAGGTCAAGGCATTCGACGAAA
CCCTGGGCCTGACAGGCCTGATCGTCACGAAGCTGGACGGCACGCCGAAAGGCGGCATTCTGGCTGCCATCGCGAAAAAT
CATCCTGTTCCCGTTTATTTTATCGGTGTCGGTGAAAAAATCGACGATTTGCAACCCTTTGTTGCCGAAGAATTTTCAAA
CGCATTGTTGAGCTAA
ATGTTTAGCTTCTTCAAAAAGAAAACCGGCGATATTCCGCCCGAACAGGATAACAGTGAATCCTCTTTGGCAGACTCGTC
ATTGACGCCACATGAGTCTTCTGAAGTCTCTCCCGGTAATATAGATGCATCTTCAGGCATTGCCAAGCAAGATACTGAAA
AAAAGCAATCCTGGCTGAGTCGCCTCAAAAGCGGGCTTGCCAAAACCTCGGCCAATCTGAATATTTTCGGTGGAACCACC
ATCGATGAAGAATTGTTCGAAGAACTGGAAACAGCTTTGCTCGTTTCAGATGTCGGAATGCCCGCCACGGAATATCTTCT
TGACGAACTTCGCCGGAAAGTGAAAGAAGAAAAGCTGACGCAGCCTTCTGAAATCAAGACGGCACTTGCCGCTTTATTGA
CCGATCTGCTGGCTCCCTTGCAAAAAAACCTCGAAATCGGCCGCCATAACCCTCTGGTTATCATGATGGCCGGTGTGAAT
GGCGCAGGTAAAACAACGACCATCGGCAAACTGGCGCAGCACCTGCAAAACAACGATCAGACCGTCCTTCTGGCAGCCGG
TGACACTTTCCGTGCTGCCGCACGGGAACAGCTTGCCGTCTGGGGCGACCGGAATAAAATTACCGTCATCGCGCAGGAAT
CCGGCGATCCGGCTGCCGTCGCTTTCGACGCCGTTCAGTCAGCAAAAGCAAAAAACATCAACGTCGTCATGGTCGACACG
GCAGGCAGGTTGCCGACGCAATCGCATTTGATGGAAGAACTTAAAAAGGTAAAACGGGTCATTGGTAAAGGGATGGATGA
AGCGCCACACGAAATCATCCTTGTCATCGATGGAAACACGGGGCAAAACGCACTGGCACAGGTCAAGGCATTCGACGAAA
CCCTGGGCCTGACAGGCCTGATCGTCACGAAGCTGGACGGCACGCCGAAAGGCGGCATTCTGGCTGCCATCGCGAAAAAT
CATCCTGTTCCCGTTTATTTTATCGGTGTCGGTGAAAAAATCGACGATTTGCAACCCTTTGTTGCCGAAGAATTTTCAAA
CGCATTGTTGAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
60.526 |
86.61 |
0.524 |