Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FPZ22_RS10255 Genome accession   NZ_CP042218
Coordinates   2231381..2231782 (+) Length   133 a.a.
NCBI ID   WP_144892701.1    Uniprot ID   A0A518N5M1
Organism   Luteimonas granuli strain Gr-4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2226381..2236782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPZ22_RS10235 (FPZ22_10235) - 2226610..2228578 (+) 1969 Protein_2028 ATP-dependent DNA helicase -
  FPZ22_RS10240 (FPZ22_10240) tsaB 2228630..2229340 (+) 711 WP_144894120.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  FPZ22_RS10245 (FPZ22_10245) - 2229344..2230132 (-) 789 WP_246121066.1 energy transducer TonB -
  FPZ22_RS10250 (FPZ22_10250) gshB 2230242..2231201 (-) 960 WP_144892699.1 glutathione synthase -
  FPZ22_RS10255 (FPZ22_10255) pilG 2231381..2231782 (+) 402 WP_144892701.1 twitching motility response regulator PilG Regulator
  FPZ22_RS10260 (FPZ22_10260) - 2231801..2232166 (+) 366 WP_144892703.1 response regulator -
  FPZ22_RS10265 (FPZ22_10265) - 2232168..2232725 (+) 558 WP_246121074.1 chemotaxis protein CheW -
  FPZ22_RS10270 (FPZ22_10270) - 2232756..2234777 (+) 2022 WP_144892705.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14980.25 Da        Isoelectric Point: 8.0328

>NTDB_id=376067 FPZ22_RS10255 WP_144892701.1 2231381..2231782(+) (pilG) [Luteimonas granuli strain Gr-4]
MTQEQTHAGSLDGLRVMVIDDSKTIRRTAETLLRREGADVVTATDGFEALAKIADQRPQIIFVDIMMPRLDGYQTCALIK
NNQLFKQTPVIMLSSKDGLFDKARGRIVGSEQYVTKPFTREELLDAIRKHVNT

Nucleotide


Download         Length: 402 bp        

>NTDB_id=376067 FPZ22_RS10255 WP_144892701.1 2231381..2231782(+) (pilG) [Luteimonas granuli strain Gr-4]
ATGACGCAGGAGCAAACCCACGCCGGCAGCCTCGACGGCCTGCGCGTGATGGTGATCGATGACTCGAAGACCATCCGCCG
CACCGCAGAAACCCTCCTGCGCCGCGAAGGCGCGGACGTGGTGACCGCGACCGACGGTTTCGAGGCGCTGGCGAAGATCG
CCGACCAGCGGCCCCAGATCATCTTCGTCGACATCATGATGCCGCGGCTGGACGGTTACCAGACCTGCGCGCTGATCAAG
AACAACCAGCTCTTCAAACAGACGCCGGTGATCATGCTCTCCTCCAAGGACGGACTGTTCGACAAGGCGCGCGGCCGCAT
CGTCGGCTCCGAGCAGTACGTCACCAAGCCTTTCACGCGCGAGGAACTCCTCGACGCGATCCGCAAGCACGTCAATACCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A518N5M1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.774

93.233

0.669

Multiple sequence alignment