Detailed information NTG0375833

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: FPS98_RS23555
• Genome accession: NZ_CP042161
• Coordinates: 4903823..4905190 (-)
• Length: 455 a.a.
• NCBI ID: WP_144618227.1
• Uniprot ID: -
• Organism: Brevibacillus brevis strain HK544
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4898823..4910190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FPS98_RS23525 (FPS98_23525)	ispF	4898836..4899309 (-)	474	WP_017247030.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
FPS98_RS23530 (FPS98_23530)	ispD	4899313..4899999 (-)	687	WP_144618222.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
FPS98_RS23535 (FPS98_23535)	-	4900027..4901115 (-)	1089	WP_144618223.1	PIN/TRAM domain-containing protein	-
FPS98_RS23540 (FPS98_23540)	-	4901403..4901798 (+)	396	WP_007716195.1	hypothetical protein	-
FPS98_RS23545 (FPS98_23545)	pssA	4901895..4902623 (-)	729	WP_017247027.1	CDP-diacylglycerol--serine O-phosphatidyltransferase	-
FPS98_RS23550 (FPS98_23550)	disA	4902738..4903814 (-)	1077	WP_144618225.1	DNA integrity scanning diadenylate cyclase DisA	-
FPS98_RS23555 (FPS98_23555)	radA	4903823..4905190 (-)	1368	WP_144618227.1	DNA repair protein RadA	Machinery gene
FPS98_RS23560 (FPS98_23560)	-	4905297..4907747 (-)	2451	WP_144618229.1	ATP-dependent Clp protease ATP-binding subunit	-
FPS98_RS23565 (FPS98_23565)	-	4907812..4908885 (-)	1074	WP_144618230.1	protein arginine kinase	-
FPS98_RS23570 (FPS98_23570)	-	4908905..4909423 (-)	519	WP_007716182.1	UvrB/UvrC motif-containing protein	-
FPS98_RS23575 (FPS98_23575)	-	4909440..4909904 (-)	465	WP_144618231.1	CtsR family transcriptional regulator	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 49418.79 Da
• Isoelectric Point: 6.8249

>NTDB_id=375833 FPS98_RS23555 WP_144618227.1 4903823..4905190(-) (radA) [Brevibacillus brevis strain HK544]
MSKYKTKYACQECGYESPKWMGKCPGCSSWNTLVEEVTVKTAHRHEGMSGGQRQSAIPLTQVASDEEPRMDTTIGELNRV
LGGGLVPGSLILVGGDPGIGKSTLLLQTSFALAHQGAKVLYVSGEESAKQIKIRADRLHLQTPPMFVLAENDLDLIEQHI
NQVDPDVLIIDSIQTVFHPTIQSAAGSVAQVREATAQLMRIAKGKGIGTFIVGHVTKEGSIAGPRMLEHMVDAVLYFEGE
RHNTFRILRAVKNRFGSTNEIGIFEMKDRGLEEVANPSEIFLAERPFGVAGSTVVASMEGTRPVLVELQALVAPTSFVTP
RRTATGVDHQRVAMIMAVLEKRMGMMLQNQDAYVNVAGGVRLDEPAVDLAIAVSIASSFRDHATNPHDVVIGEIGLTGEV
RGVSRIEQRVREAHKLGFKRVIIPEKNIRGLDAPADIQVIGVSNIADALNEVIRR

Nucleotide

• Length: 1368 bp

>NTDB_id=375833 FPS98_RS23555 WP_144618227.1 4903823..4905190(-) (radA) [Brevibacillus brevis strain HK544]
ATGTCAAAGTATAAAACGAAATACGCGTGTCAAGAATGTGGCTATGAATCGCCAAAATGGATGGGAAAATGCCCGGGGTG
CAGTAGTTGGAACACCTTGGTGGAGGAAGTGACGGTTAAAACTGCACATCGTCACGAAGGGATGAGCGGCGGCCAGCGCC
AATCTGCGATTCCATTGACCCAGGTAGCCAGTGACGAAGAGCCACGCATGGATACGACAATCGGAGAATTGAATCGTGTT
CTTGGTGGAGGACTTGTTCCGGGTTCACTCATTTTAGTTGGGGGAGACCCCGGAATCGGAAAATCGACATTGCTTTTGCA
GACATCTTTTGCCTTGGCTCATCAAGGGGCAAAGGTTCTCTATGTATCTGGAGAGGAGTCGGCAAAACAAATCAAAATTC
GCGCGGATCGACTCCATTTGCAAACGCCGCCGATGTTTGTATTGGCAGAAAATGATTTGGATTTGATCGAACAGCATATT
AATCAAGTAGACCCGGATGTGCTGATTATTGACTCGATCCAGACCGTGTTTCACCCGACGATCCAATCGGCTGCTGGAAG
TGTCGCACAAGTACGGGAGGCGACTGCCCAATTGATGCGGATTGCAAAAGGGAAAGGGATTGGTACCTTTATTGTCGGTC
ACGTTACCAAGGAAGGCTCCATCGCTGGTCCGCGTATGCTTGAGCACATGGTAGATGCTGTTCTCTATTTTGAAGGGGAG
CGCCACAATACGTTTCGAATTTTGCGCGCCGTCAAAAACCGCTTTGGTTCGACAAATGAAATCGGTATTTTTGAGATGAA
GGATCGCGGCTTGGAGGAAGTGGCGAATCCTTCTGAGATATTTTTGGCAGAGCGTCCATTTGGTGTTGCGGGTTCCACGG
TCGTAGCCAGCATGGAGGGCACACGTCCCGTTTTGGTTGAGTTGCAAGCTCTCGTTGCCCCAACCAGCTTTGTAACCCCA
CGGAGAACGGCAACAGGGGTCGATCATCAGCGTGTAGCGATGATTATGGCAGTGTTGGAAAAGCGCATGGGCATGATGCT
GCAAAATCAGGATGCATATGTAAACGTAGCAGGTGGGGTCAGATTGGATGAGCCAGCGGTTGATTTGGCGATTGCCGTAA
GCATTGCTAGCAGTTTCCGTGACCACGCTACCAATCCGCATGATGTCGTTATCGGAGAAATTGGCCTGACTGGTGAGGTG
CGAGGTGTCTCTCGAATTGAGCAACGAGTACGAGAAGCACATAAGTTAGGCTTTAAGCGTGTTATCATCCCGGAGAAAAA
CATCCGCGGTCTGGATGCGCCAGCAGATATTCAAGTAATTGGTGTGAGCAATATTGCCGATGCGTTGAACGAGGTGATAA
GGAGGTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (71-219)

• Subunit ChlI of Mg-chelatase (ChlI) (329-427)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	65.929	99.341	0.655
radA	Streptococcus mitis NCTC 12261	58.057	99.56	0.578
radA	Streptococcus pneumoniae Rx1	58.057	99.56	0.578
radA	Streptococcus pneumoniae D39	58.057	99.56	0.578
radA	Streptococcus pneumoniae R6	58.057	99.56	0.578
radA	Streptococcus pneumoniae TIGR4	58.057	99.56	0.578
radA	Streptococcus mitis SK321	58.057	99.56	0.578