Detailed information NTG0375752

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: G9V97_RS12405
• Genome accession: NZ_CP049936
• Coordinates: 2643654..2644679 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain JL05
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2638654..2649679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G9V97_RS12395 (G9V97_12385)	rpmE	2640885..2641097 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
G9V97_RS12400 (G9V97_12390)	priA	2641300..2643498 (+)	2199	WP_001315935.1	primosomal protein N'	Machinery gene
G9V97_RS12405 (G9V97_12395)	cytR	2643654..2644679 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
G9V97_RS12410 (G9V97_12400)	ftsN	2644771..2645730 (+)	960	WP_000068834.1	cell division protein FtsN	-
G9V97_RS12415 (G9V97_12405)	hslV	2645823..2646353 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
G9V97_RS12420 (G9V97_12410)	hslU	2646363..2647694 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
G9V97_RS12425 (G9V97_12415)	menA	2647761..2648687 (+)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
G9V97_RS12430 (G9V97_12420)	rraA	2648780..2649265 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
G9V97_RS12435 (G9V97_12425)	zapB	2649350..2649595 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=375752 G9V97_RS12405 WP_000644904.1 2643654..2644679(+) (cytR) [Escherichia coli strain JL05]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=375752 G9V97_RS12405 WP_000644904.1 2643654..2644679(+) (cytR) [Escherichia coli strain JL05]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628