Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   FP484_RS13530 Genome accession   NZ_CP042107
Coordinates   2661124..2661840 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain B8-13D     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2656124..2666840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FP484_RS13500 (FP484_13500) - 2656341..2656967 (+) 627 WP_000522384.1 nitroreductase family protein -
  FP484_RS13505 (FP484_13505) - 2657328..2658113 (+) 786 WP_000867951.1 carbon-nitrogen family hydrolase -
  FP484_RS14690 hld 2658713..2658793 (-) 81 WP_000046022.1 delta-hemolysin -
  FP484_RS13515 (FP484_13515) - 2659083..2659646 (+) 564 WP_001105696.1 accessory gene regulator AgrB -
  FP484_RS13520 (FP484_13520) agrD 2659649..2659792 (+) 144 WP_001094921.1 cyclic lactone autoinducer peptide AgrD -
  FP484_RS13525 (FP484_13525) agrC 2659822..2661105 (+) 1284 WP_000447890.1 quorum-sensing sensor histidine kinase AgrC -
  FP484_RS13530 (FP484_13530) agrA 2661124..2661840 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  FP484_RS13535 (FP484_13535) - 2661912..2662021 (+) 110 Protein_2601 hypothetical protein -
  FP484_RS13540 (FP484_13540) - 2662209..2663168 (-) 960 WP_001253312.1 carbohydrate kinase -
  FP484_RS13545 (FP484_13545) - 2663165..2664649 (-) 1485 WP_000141432.1 sucrose-6-phosphate hydrolase -
  FP484_RS13550 (FP484_13550) - 2664798..2665748 (-) 951 WP_000790331.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=375715 FP484_RS13530 WP_000688492.1 2661124..2661840(+) (agrA) [Staphylococcus aureus strain B8-13D]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=375715 FP484_RS13530 WP_000688492.1 2661124..2661840(+) (agrA) [Staphylococcus aureus strain B8-13D]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment