Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   G4G26_RS20145 Genome accession   NZ_CP049924
Coordinates   3937799..3938488 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain So1b     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3932799..3943488
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4G26_RS20125 (G4G26_20190) yxeA 3933705..3934052 (-) 348 WP_015715011.1 YxeA family protein -
  G4G26_RS20130 (G4G26_20195) yxdM 3934066..3935934 (-) 1869 WP_015715012.1 ABC transporter permease YxdM -
  G4G26_RS20135 (G4G26_20200) yxdL 3935909..3936682 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  G4G26_RS20140 (G4G26_20205) yxdK 3936825..3937802 (-) 978 WP_015715013.1 two-component system sensor histidine kinase YxdK -
  G4G26_RS20145 (G4G26_20210) braR 3937799..3938488 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  G4G26_RS20150 (G4G26_20215) iolJ 3938596..3939468 (-) 873 WP_014478478.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  G4G26_RS20155 (G4G26_20220) iolI 3939489..3940325 (-) 837 WP_015715014.1 2-keto-myo-inositol isomerase -
  G4G26_RS20160 (G4G26_20225) iolH 3940411..3941280 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  G4G26_RS20165 (G4G26_20230) iolG 3941300..3942334 (-) 1035 WP_003244482.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=375710 G4G26_RS20145 WP_003243527.1 3937799..3938488(-) (braR) [Bacillus subtilis strain So1b]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=375710 G4G26_RS20145 WP_003243527.1 3937799..3938488(-) (braR) [Bacillus subtilis strain So1b]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTCCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406