Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   G4G26_RS17605 Genome accession   NZ_CP049924
Coordinates   3437719..3438432 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain So1b     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3432719..3443432
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4G26_RS17585 (G4G26_17640) yvcT 3432864..3433841 (+) 978 WP_074794322.1 D-glycerate dehydrogenase -
  G4G26_RS17590 (G4G26_17645) psdB 3433878..3435818 (-) 1941 WP_015714768.1 lantibiotic ABC transporter permease PsdB -
  G4G26_RS17595 (G4G26_17650) psdA 3435793..3436572 (-) 780 WP_015714769.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  G4G26_RS17600 (G4G26_17655) psdS 3436655..3437725 (-) 1071 WP_015714770.1 two-component sensor histidine kinase PsdS -
  G4G26_RS17605 (G4G26_17660) braR 3437719..3438432 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  G4G26_RS17610 (G4G26_17665) - 3438579..3438788 (+) 210 WP_014665489.1 hypothetical protein -
  G4G26_RS17615 (G4G26_17670) yvcN 3438824..3439588 (-) 765 WP_015714771.1 arylamine N-acetyltransferase -
  G4G26_RS17620 (G4G26_17675) crh 3439589..3439846 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  G4G26_RS17625 (G4G26_17680) whiA 3439870..3440820 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  G4G26_RS17630 (G4G26_17685) mgfK 3440843..3441796 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  G4G26_RS17635 (G4G26_17690) rapZ 3441798..3442685 (-) 888 WP_003243903.1 RNase adapter RapZ -
  G4G26_RS17640 (G4G26_17695) yvcI 3442710..3443186 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=375695 G4G26_RS17605 WP_003244535.1 3437719..3438432(-) (braR) [Bacillus subtilis strain So1b]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=375695 G4G26_RS17605 WP_003244535.1 3437719..3438432(-) (braR) [Bacillus subtilis strain So1b]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGTAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43