Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   G4G26_RS15235 Genome accession   NZ_CP049924
Coordinates   2975570..2976265 (-) Length   231 a.a.
NCBI ID   WP_088467346.1    Uniprot ID   -
Organism   Bacillus subtilis strain So1b     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2970570..2981265
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4G26_RS15215 (G4G26_15265) yttA 2970997..2971743 (+) 747 WP_015714557.1 LMBR1 domain-containing protein -
  G4G26_RS15220 (G4G26_15270) bceB 2971780..2973720 (-) 1941 WP_182932161.1 bacitracin ABC transporter permease BceB -
  G4G26_RS15225 (G4G26_15275) bceA 2973710..2974471 (-) 762 WP_015714559.1 bacitracin ABC transporter ATP-binding protein BceA -
  G4G26_RS15230 (G4G26_15280) bceS 2974573..2975577 (-) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  G4G26_RS15235 (G4G26_15285) braR 2975570..2976265 (-) 696 WP_088467346.1 two-component response regulator BceR Regulator
  G4G26_RS15240 (G4G26_15290) ytrF 2976362..2977672 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  G4G26_RS15245 (G4G26_15295) ytrE 2977662..2978357 (-) 696 WP_182932162.1 ABC transporter ATP-binding protein YtrE -
  G4G26_RS15250 (G4G26_15300) ytrD 2978372..2979349 (-) 978 WP_163259804.1 ABC transporter permease YtrD -
  G4G26_RS15255 (G4G26_15305) ytrC 2979379..2980365 (-) 987 WP_163259802.1 ABC transporter permease YtrC -
  G4G26_RS15260 (G4G26_15310) ytrB 2980359..2981237 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26921.82 Da        Isoelectric Point: 5.3731

>NTDB_id=375685 G4G26_RS15235 WP_088467346.1 2975570..2976265(-) (braR) [Bacillus subtilis strain So1b]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDVEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=375685 G4G26_RS15235 WP_088467346.1 2975570..2976265(-) (braR) [Bacillus subtilis strain So1b]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGTGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAACGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377