Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   FP484_RS02475 Genome accession   NZ_CP042107
Coordinates   470611..471498 (-) Length   295 a.a.
NCBI ID   WP_145391249.1    Uniprot ID   -
Organism   Staphylococcus aureus strain B8-13D     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 465611..476498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FP484_RS02440 (FP484_02440) - 465630..465722 (+) 93 WP_010956583.1 hypothetical protein -
  FP484_RS02445 (FP484_02445) - 465830..466327 (-) 498 WP_001065268.1 glutathione peroxidase -
  FP484_RS02450 (FP484_02450) - 466337..466597 (-) 261 WP_001791974.1 hypothetical protein -
  FP484_RS02460 (FP484_02460) - 466979..467092 (-) 114 Protein_484 hypothetical protein -
  FP484_RS02465 (FP484_02465) - 467751..469751 (-) 2001 WP_000776751.1 ABC transporter permease -
  FP484_RS02470 (FP484_02470) - 469748..470503 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  FP484_RS02475 (FP484_02475) braS 470611..471498 (-) 888 WP_145391249.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  FP484_RS02480 (FP484_02480) braR 471509..472174 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  FP484_RS02485 (FP484_02485) - 472200..472400 (-) 201 WP_000604730.1 hypothetical protein -
  FP484_RS02490 (FP484_02490) - 472598..474022 (+) 1425 WP_000953756.1 alkaline phosphatase -
  FP484_RS14680 (FP484_02495) - 474082..474183 (-) 102 WP_000731976.1 SE2200 family small protein -
  FP484_RS02500 (FP484_02500) - 474305..474760 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  FP484_RS02505 (FP484_02505) - 475005..475766 (-) 762 WP_000323441.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 33992.26 Da        Isoelectric Point: 6.0874

>NTDB_id=375677 FP484_RS02475 WP_145391249.1 470611..471498(-) (braS) [Staphylococcus aureus strain B8-13D]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLGLGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLHVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=375677 FP484_RS02475 WP_145391249.1 470611..471498(-) (braS) [Staphylococcus aureus strain B8-13D]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGGACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTACACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.661

100

0.997


Multiple sequence alignment