Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | G4G26_RS12920 | Genome accession | NZ_CP049924 |
| Coordinates | 2529134..2530261 (+) | Length | 375 a.a. |
| NCBI ID | WP_015714307.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain So1b | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2524134..2535261
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G4G26_RS12890 (G4G26_12925) | - | 2524570..2525163 (-) | 594 | WP_015714302.1 | TetR/AcrR family transcriptional regulator | - |
| G4G26_RS12895 (G4G26_12930) | - | 2525321..2526316 (+) | 996 | WP_015714303.1 | acryloyl-CoA reductase | - |
| G4G26_RS12900 (G4G26_12935) | - | 2526599..2526739 (+) | 141 | WP_231940260.1 | DUF255 domain-containing protein | - |
| G4G26_RS12905 (G4G26_12940) | - | 2526847..2527686 (-) | 840 | WP_068947613.1 | collagen-like protein | - |
| G4G26_RS12910 (G4G26_12945) | - | 2527737..2528084 (-) | 348 | WP_015714305.1 | S-Ena type endospore appendage | - |
| G4G26_RS12915 (G4G26_12950) | - | 2528161..2528826 (-) | 666 | WP_015714306.1 | CotZ-related putative spore coat protein | - |
| G4G26_RS12920 (G4G26_12955) | rapC | 2529134..2530261 (+) | 1128 | WP_015714307.1 | response regulator aspartate phosphatase RapE | Regulator |
| G4G26_RS12925 (G4G26_12960) | phrE | 2530251..2530385 (+) | 135 | WP_014114495.1 | phosphatase RapE inhibitor PhrE | - |
| G4G26_RS12930 (G4G26_12965) | - | 2530495..2530654 (+) | 160 | Protein_2513 | hypothetical protein | - |
| G4G26_RS12935 (G4G26_12970) | yqcG | 2531024..2532619 (+) | 1596 | WP_015714309.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| G4G26_RS12940 (G4G26_12975) | yqcF | 2532634..2533212 (+) | 579 | WP_015714310.1 | type VII secretion system immunity protein YqcF | - |
| G4G26_RS12945 (G4G26_12980) | - | 2533330..2533476 (+) | 147 | WP_009967791.1 | hypothetical protein | - |
| G4G26_RS12950 (G4G26_12985) | - | 2533473..2533835 (-) | 363 | WP_003229947.1 | hypothetical protein | - |
| G4G26_RS12955 (G4G26_12990) | - | 2533851..2534330 (-) | 480 | WP_004399085.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 44640.47 Da Isoelectric Point: 7.5547
>NTDB_id=375668 G4G26_RS12920 WP_015714307.1 2529134..2530261(+) (rapC) [Bacillus subtilis strain So1b]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTMPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTMPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
Nucleotide
Download Length: 1128 bp
>NTDB_id=375668 G4G26_RS12920 WP_015714307.1 2529134..2530261(+) (rapC) [Bacillus subtilis strain So1b]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTTACTGA
TGCTGAAATGTTAAAAGCTGAAATCGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAT
TAATGGCCTTCCGCCATAAAATCATGTTGGAATACACGATGCCATCCGATGAAAACCGAATGGAACTTTCAGAATATTTA
AAGAAAATCGAAGGGCATAAGAAGAAGCTAGACAATATGCGGGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCTACAATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAACTGTCTGAAGTCTATTATCATATGAAAATGACACACATTTCGATGCATTACGCTGAG
CTTTCATATAACATCTATAAAAAACACGAGCTTTATTCTGTTCGGCGTATACAGTGCCATTTTGTCATTGCCGGTAACTA
TGATGACCTTGAAAATCATGAGAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCATATCTATGCCACTGCGTTTTTCAATCTCGGCAATTGTTATCACAAAATGGACAACTTAAATAAGGCTGCTCGT
TACATCGAACAAGCCTTGGTTCAATACAGAAAAATTAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCATTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATTAGAAGTGCTGTAGATTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTTACTGA
TGCTGAAATGTTAAAAGCTGAAATCGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAT
TAATGGCCTTCCGCCATAAAATCATGTTGGAATACACGATGCCATCCGATGAAAACCGAATGGAACTTTCAGAATATTTA
AAGAAAATCGAAGGGCATAAGAAGAAGCTAGACAATATGCGGGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCTACAATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAACTGTCTGAAGTCTATTATCATATGAAAATGACACACATTTCGATGCATTACGCTGAG
CTTTCATATAACATCTATAAAAAACACGAGCTTTATTCTGTTCGGCGTATACAGTGCCATTTTGTCATTGCCGGTAACTA
TGATGACCTTGAAAATCATGAGAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCATATCTATGCCACTGCGTTTTTCAATCTCGGCAATTGTTATCACAAAATGGACAACTTAAATAAGGCTGCTCGT
TACATCGAACAAGCCTTGGTTCAATACAGAAAAATTAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCATTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATTAGAAGTGCTGTAGATTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.897 |
100 |
0.413 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
38.196 |
100 |
0.384 |