Detailed information NTG0375634

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G4G26_RS08420
• Genome accession: NZ_CP049924
• Coordinates: 1627489..1628478 (+)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain So1b
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1622489..1633478

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4G26_RS08405 (G4G26_08440)	acpP	1622686..1622919 (+)	234	WP_003154310.1	acyl carrier protein	-
G4G26_RS08410 (G4G26_08445)	rncS	1623059..1623808 (+)	750	WP_003232030.1	ribonuclease III	-
G4G26_RS08415 (G4G26_08450)	smc	1623909..1627469 (+)	3561	WP_015715874.1	chromosome segregation protein SMC	-
G4G26_RS08420 (G4G26_08455)	pilA	1627489..1628478 (+)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
G4G26_RS08425 (G4G26_08460)	ylqB	1628515..1629000 (-)	486	WP_003245834.1	Ig-like domain-containing protein	-
G4G26_RS08430 (G4G26_08465)	ylxM	1629177..1629509 (+)	333	WP_003238590.1	putative DNA-binding protein	-
G4G26_RS08435 (G4G26_08470)	ffh	1629523..1630863 (+)	1341	WP_003232020.1	signal recognition particle protein	-
G4G26_RS08440 (G4G26_08475)	rpsP	1630969..1631241 (+)	273	WP_003220815.1	30S ribosomal protein S16	-
G4G26_RS08445 (G4G26_08480)	ylqC	1631241..1631486 (+)	246	WP_014476792.1	KH domain-containing protein	-
G4G26_RS08450 (G4G26_08485)	ylqD	1631608..1631994 (+)	387	WP_015715875.1	YlqD family protein	-
G4G26_RS08455 (G4G26_08490)	rimM	1631999..1632523 (+)	525	WP_015715876.1	ribosome maturation factor RimM	-
G4G26_RS08460 (G4G26_08495)	trmD	1632520..1633251 (+)	732	WP_015715877.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=375634 G4G26_RS08420 WP_003232026.1 1627489..1628478(+) (pilA) [Bacillus subtilis strain So1b]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=375634 G4G26_RS08420 WP_003232026.1 1627489..1628478(+) (pilA) [Bacillus subtilis strain So1b]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGTGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTCAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCCGGAAGCGATCC
GGCAGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGGCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAATTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGACCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401