Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   G4G26_RS07550 Genome accession   NZ_CP049924
Coordinates   1451138..1451722 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   G4NVP2
Organism   Bacillus subtilis strain So1b     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1446138..1456722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4G26_RS07520 (G4G26_07555) dapD 1446324..1447034 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  G4G26_RS07525 (G4G26_07560) dapI 1447104..1448228 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  G4G26_RS07530 (G4G26_07565) ykuS 1448290..1448535 (+) 246 WP_003232382.1 YkuS family protein -
  G4G26_RS07535 (G4G26_07570) mscT 1448572..1449375 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  G4G26_RS07540 (G4G26_07575) ahpA 1449612..1450154 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  G4G26_RS07545 (G4G26_07580) ykuV 1450226..1450672 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  G4G26_RS07550 (G4G26_07585) rok 1451138..1451722 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  G4G26_RS07555 (G4G26_07590) cse15 1451763..1452728 (-) 966 WP_015715807.1 spore protein Cse15 -
  G4G26_RS07560 (G4G26_07595) mobA 1452865..1453464 (+) 600 WP_015715808.1 molybdenum cofactor guanylyltransferase -
  G4G26_RS07565 (G4G26_07600) moeB 1453515..1454534 (+) 1020 WP_015715809.1 molybdopterin-synthase adenylyltransferase MoeB -
  G4G26_RS07570 (G4G26_07605) glp 1454552..1455844 (+) 1293 WP_015715810.1 gephyrin-like molybdotransferase Glp -
  G4G26_RS07575 (G4G26_07610) mobB 1455805..1456326 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=375626 G4G26_RS07550 WP_014113628.1 1451138..1451722(+) (rok) [Bacillus subtilis strain So1b]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=375626 G4G26_RS07550 WP_014113628.1 1451138..1451722(+) (rok) [Bacillus subtilis strain So1b]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVP2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974