Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   FP510_RS02720 Genome accession   NZ_CP042000
Coordinates   476610..477683 (+) Length   357 a.a.
NCBI ID   WP_000790651.1    Uniprot ID   A0AAW6XPT9
Organism   Streptococcus agalactiae strain GBS19     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 471610..482683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FP510_RS02690 (FP510_02765) - 472501..473565 (+) 1065 WP_000021293.1 MmcQ/YjbR family DNA-binding protein -
  FP510_RS02695 (FP510_02770) asnA 473680..474672 (+) 993 WP_000748015.1 aspartate--ammonia ligase -
  FP510_RS02700 (FP510_02775) - 474717..475166 (-) 450 WP_000592261.1 hypothetical protein -
  FP510_RS02705 (FP510_02785) rsmD 475297..475836 (+) 540 WP_001266830.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  FP510_RS02710 (FP510_02790) - 475848..476138 (+) 291 WP_000384889.1 hypothetical protein -
  FP510_RS02715 (FP510_02795) coaD 476135..476620 (+) 486 WP_000161894.1 pantetheine-phosphate adenylyltransferase -
  FP510_RS02720 (FP510_02800) sepM 476610..477683 (+) 1074 WP_000790651.1 SepM family pheromone-processing serine protease Regulator
  FP510_RS02725 (FP510_02805) - 477758..479092 (+) 1335 WP_000137518.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  FP510_RS02730 (FP510_02810) - 479161..479739 (+) 579 WP_001224500.1 YutD-like domain-containing protein -
  FP510_RS02735 (FP510_02815) rlmN 479790..480896 (+) 1107 WP_000039434.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  FP510_RS02740 (FP510_02820) - 480896..481411 (+) 516 WP_000919803.1 VanZ family protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39131.31 Da        Isoelectric Point: 10.4286

>NTDB_id=375409 FP510_RS02720 WP_000790651.1 476610..477683(+) (sepM) [Streptococcus agalactiae strain GBS19]
MKNKDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESVYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=375409 FP510_RS02720 WP_000790651.1 476610..477683(+) (sepM) [Streptococcus agalactiae strain GBS19]
GTGAAGAATAAAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTGGTGAGGCTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTTTCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCGTCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCGGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATCATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.027

94.958

0.655


Multiple sequence alignment