Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | G9W36_RS17345 | Genome accession | NZ_CP049839 |
| Coordinates | 3552572..3553087 (-) | Length | 171 a.a. |
| NCBI ID | WP_001130208.1 | Uniprot ID | Q8FEP8 |
| Organism | Escherichia coli strain UPEC-455U/190220 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3547572..3558087
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9W36_RS17320 (G9W36_17285) | ygaH | 3547987..3548322 (+) | 336 | WP_000119749.1 | L-valine transporter subunit YgaH | - |
| G9W36_RS17325 (G9W36_17295) | emrR | 3548413..3548943 (+) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| G9W36_RS17330 (G9W36_17300) | emrA | 3549070..3550242 (+) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| G9W36_RS17335 (G9W36_17305) | emrB | 3550259..3551797 (+) | 1539 | WP_001539415.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| G9W36_RS17340 (G9W36_17310) | tnpA | 3551977..3552435 (+) | 459 | WP_000526115.1 | IS200/IS605-like element IS200C family transposase | - |
| G9W36_RS17345 (G9W36_17315) | luxS | 3552572..3553087 (-) | 516 | WP_001130208.1 | S-ribosylhomocysteine lyase | Regulator |
| G9W36_RS17350 (G9W36_17320) | gshA | 3553237..3554793 (-) | 1557 | WP_001539417.1 | glutamate--cysteine ligase | - |
| G9W36_RS17355 (G9W36_17325) | yqaA | 3554866..3555294 (-) | 429 | WP_001287462.1 | YqaA family protein | - |
| G9W36_RS17360 (G9W36_17330) | yqaB | 3555291..3555857 (-) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| G9W36_RS17390 (G9W36_17360) | csrA | 3557047..3557232 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19443.21 Da Isoelectric Point: 5.0362
>NTDB_id=375363 G9W36_RS17345 WP_001130208.1 3552572..3553087(-) (luxS) [Escherichia coli strain UPEC-455U/190220]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=375363 G9W36_RS17345 WP_001130208.1 3552572..3553087(-) (luxS) [Escherichia coli strain UPEC-455U/190220]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCAAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCAAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |