Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   FP508_RS02700 Genome accession   NZ_CP041998
Coordinates   473955..475028 (+) Length   357 a.a.
NCBI ID   WP_000790651.1    Uniprot ID   A0AAW6XPT9
Organism   Streptococcus agalactiae strain GBS7     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 468955..480028
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FP508_RS02670 (FP508_02745) - 469846..470910 (+) 1065 WP_000021293.1 MmcQ/YjbR family DNA-binding protein -
  FP508_RS02675 (FP508_02750) asnA 471025..472017 (+) 993 WP_000748015.1 aspartate--ammonia ligase -
  FP508_RS02680 (FP508_02755) - 472062..472511 (-) 450 WP_000592261.1 hypothetical protein -
  FP508_RS02685 (FP508_02765) rsmD 472642..473181 (+) 540 WP_001266830.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  FP508_RS02690 (FP508_02770) - 473193..473483 (+) 291 WP_000384889.1 hypothetical protein -
  FP508_RS02695 (FP508_02775) coaD 473480..473965 (+) 486 WP_000161894.1 pantetheine-phosphate adenylyltransferase -
  FP508_RS02700 (FP508_02780) sepM 473955..475028 (+) 1074 WP_000790651.1 SepM family pheromone-processing serine protease Regulator
  FP508_RS02705 (FP508_02785) - 475103..476437 (+) 1335 WP_000137518.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  FP508_RS02710 (FP508_02790) - 476506..477084 (+) 579 WP_001224500.1 YutD-like domain-containing protein -
  FP508_RS02715 (FP508_02795) rlmN 477135..478241 (+) 1107 WP_000039434.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  FP508_RS02720 (FP508_02800) - 478241..478756 (+) 516 WP_000919803.1 VanZ family protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39131.31 Da        Isoelectric Point: 10.4286

>NTDB_id=375303 FP508_RS02700 WP_000790651.1 473955..475028(+) (sepM) [Streptococcus agalactiae strain GBS7]
MKNKDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESVYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=375303 FP508_RS02700 WP_000790651.1 473955..475028(+) (sepM) [Streptococcus agalactiae strain GBS7]
GTGAAGAATAAAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTGGTGAGGCTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTTTCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCGTCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCGGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATCATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.027

94.958

0.655


Multiple sequence alignment