Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | FP432_RS06835 | Genome accession | NZ_CP041982 |
| Coordinates | 1360698..1362497 (-) | Length | 599 a.a. |
| NCBI ID | WP_265488574.1 | Uniprot ID | - |
| Organism | Lactobacillus sp. PV034 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1355698..1367497
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FP432_RS06810 (FP432_06715) | pfkB | 1356382..1357296 (+) | 915 | WP_265488570.1 | 1-phosphofructokinase | - |
| FP432_RS06815 (FP432_06720) | - | 1357412..1358203 (+) | 792 | WP_265488571.1 | Cof-type HAD-IIB family hydrolase | - |
| FP432_RS06820 (FP432_06725) | - | 1358295..1359173 (+) | 879 | WP_265488572.1 | metal ABC transporter solute-binding protein, Zn/Mn family | - |
| FP432_RS06825 (FP432_06730) | - | 1359232..1359852 (+) | 621 | WP_265489617.1 | metal ABC transporter ATP-binding protein | - |
| FP432_RS06830 (FP432_06735) | - | 1359852..1360652 (+) | 801 | WP_265488573.1 | metal ABC transporter permease | - |
| FP432_RS06835 (FP432_06740) | pepF | 1360698..1362497 (-) | 1800 | WP_265488574.1 | oligoendopeptidase F | Regulator |
| FP432_RS06840 (FP432_06745) | - | 1362654..1363805 (+) | 1152 | WP_265488575.1 | LCP family protein | - |
| FP432_RS06845 (FP432_06750) | - | 1363918..1364217 (+) | 300 | WP_265488576.1 | hypothetical protein | - |
| FP432_RS06850 (FP432_06755) | - | 1364201..1364857 (+) | 657 | WP_265488577.1 | ArsR/SmtB family transcription factor | - |
| FP432_RS06855 (FP432_06760) | trxB | 1364972..1365907 (+) | 936 | WP_265488578.1 | thioredoxin-disulfide reductase | - |
| FP432_RS06860 (FP432_06765) | - | 1365907..1366563 (+) | 657 | WP_265488579.1 | DsbA family oxidoreductase | - |
| FP432_RS06865 | - | 1366582..1366719 (+) | 138 | WP_265488580.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 599 a.a. Molecular weight: 68272.34 Da Isoelectric Point: 4.6716
>NTDB_id=375164 FP432_RS06835 WP_265488574.1 1360698..1362497(-) (pepF) [Lactobacillus sp. PV034]
MAIPTRDEVAQDLKWDLSGVFENDAAWEKEYQAINEAIPNLAKLKGSLVQSGQKLYEGITKILNIERKLERVYVYATMSS
DVDTSNTKYLGYVAKAQALLSNFSAATSFVDPEILSIPAAELDKYMVDEPRLKDYAHRIETVTNKRSHTLPAAQEKIIAA
AQNALESSANTFNVLTNSDIQFGFTQDDNGEMVQLSDGLYSLLIQSQDRNVRKNAFETMYDAYGQFQNSLASTLAGTTKQ
HNFDAKMHKYHSAREDALSNNNIPTEVYDNLIEEVNKHLDLLHRYVALRKKILNLPDLQMYDMYVPLTGEPALSYNFEEA
KIEAKKALLPLGEDYLKHVDYIFNNRVIDVVESQNKVTGAYSGGSYDTDPYELLNWENNLDSLFTLVHETGHSVHSWYTR
HTQPFIYGDYPIFVAEIASTTNENILTEYFLDKITEPKTRAFILNHYLDSFKGTLFRQTQFAEFEQFIHETDAQGAPLTA
EVLSDYYSRLNQKYYGDSVEPGGDIALEWARIPHFYYNFYVYQYATGFAAATALANKIVHGTPEQTQAYIDFLKAGSSDY
PIEIMKKAGVDMTQKNYLEDAFTTFEKRLNEFENLINQL
MAIPTRDEVAQDLKWDLSGVFENDAAWEKEYQAINEAIPNLAKLKGSLVQSGQKLYEGITKILNIERKLERVYVYATMSS
DVDTSNTKYLGYVAKAQALLSNFSAATSFVDPEILSIPAAELDKYMVDEPRLKDYAHRIETVTNKRSHTLPAAQEKIIAA
AQNALESSANTFNVLTNSDIQFGFTQDDNGEMVQLSDGLYSLLIQSQDRNVRKNAFETMYDAYGQFQNSLASTLAGTTKQ
HNFDAKMHKYHSAREDALSNNNIPTEVYDNLIEEVNKHLDLLHRYVALRKKILNLPDLQMYDMYVPLTGEPALSYNFEEA
KIEAKKALLPLGEDYLKHVDYIFNNRVIDVVESQNKVTGAYSGGSYDTDPYELLNWENNLDSLFTLVHETGHSVHSWYTR
HTQPFIYGDYPIFVAEIASTTNENILTEYFLDKITEPKTRAFILNHYLDSFKGTLFRQTQFAEFEQFIHETDAQGAPLTA
EVLSDYYSRLNQKYYGDSVEPGGDIALEWARIPHFYYNFYVYQYATGFAAATALANKIVHGTPEQTQAYIDFLKAGSSDY
PIEIMKKAGVDMTQKNYLEDAFTTFEKRLNEFENLINQL
Nucleotide
Download Length: 1800 bp
>NTDB_id=375164 FP432_RS06835 WP_265488574.1 1360698..1362497(-) (pepF) [Lactobacillus sp. PV034]
ATGGCTATTCCAACTAGAGATGAAGTAGCACAAGATCTAAAATGGGATTTGAGCGGTGTTTTTGAAAATGATGCAGCTTG
GGAGAAAGAATACCAGGCTATTAATGAAGCTATTCCTAACTTAGCAAAGTTAAAAGGTAGCCTAGTACAATCTGGGCAAA
AGTTATATGAAGGCATAACAAAAATTTTAAATATTGAGCGCAAATTAGAAAGGGTATACGTTTATGCCACTATGTCTAGC
GACGTAGATACTAGTAACACCAAATATTTAGGATATGTGGCTAAGGCTCAAGCTTTGCTTAGTAATTTCTCAGCGGCTAC
TTCATTCGTAGATCCTGAAATTTTGAGTATTCCAGCTGCCGAATTAGACAAATATATGGTAGACGAACCTAGACTAAAAG
ATTATGCACATCGCATTGAAACAGTAACCAATAAGCGATCACATACCTTGCCTGCAGCCCAAGAAAAAATTATTGCAGCT
GCTCAAAATGCTTTAGAAAGTTCAGCTAATACTTTTAATGTTTTAACCAACTCAGATATTCAATTTGGTTTTACTCAAGA
TGACAATGGGGAAATGGTTCAACTTTCCGATGGACTTTACTCACTTTTAATTCAATCACAAGATCGCAACGTACGAAAAA
ATGCTTTTGAGACAATGTATGATGCTTACGGTCAATTTCAGAATTCCCTTGCTTCTACCTTAGCCGGTACAACTAAACAA
CATAATTTTGATGCAAAAATGCATAAATATCACTCTGCTCGTGAAGACGCACTAAGTAATAATAATATTCCAACTGAGGT
TTATGATAATTTAATTGAAGAAGTTAACAAACATTTAGATTTACTTCATCGCTATGTTGCTTTACGAAAAAAGATTTTAA
ATTTACCTGATCTCCAAATGTACGACATGTATGTACCTCTCACTGGAGAACCAGCTTTATCTTACAATTTTGAAGAAGCA
AAAATTGAAGCTAAAAAAGCTCTTCTTCCTTTGGGGGAAGATTACCTAAAACATGTAGATTATATTTTCAATAATCGGGT
AATCGATGTAGTTGAATCACAAAACAAAGTTACCGGTGCATATTCAGGTGGCTCTTATGATACTGATCCTTACGAACTAT
TAAACTGGGAAAACAATTTAGACTCCCTCTTTACTTTAGTTCATGAAACAGGTCACTCAGTTCATTCTTGGTACACTCGT
CATACTCAACCTTTTATTTATGGTGATTATCCAATTTTTGTAGCAGAAATTGCTTCAACCACAAATGAAAATATTCTAAC
TGAATATTTCTTAGATAAAATCACTGAACCTAAAACAAGAGCATTCATTTTGAATCACTACTTAGATTCGTTTAAGGGTA
CTTTATTCCGCCAAACTCAATTTGCTGAATTTGAACAATTTATTCATGAAACTGATGCTCAAGGTGCTCCTTTAACTGCA
GAAGTTTTAAGCGATTATTATAGCCGACTAAATCAAAAATATTATGGCGATAGCGTCGAACCAGGTGGAGATATTGCCTT
GGAATGGGCTCGTATCCCTCACTTTTATTACAACTTTTATGTTTACCAATACGCTACTGGTTTTGCTGCAGCTACTGCCC
TAGCAAATAAAATTGTTCATGGAACTCCTGAACAAACGCAAGCTTACATTGATTTTCTAAAAGCTGGATCTAGTGACTAC
CCAATTGAAATTATGAAAAAAGCAGGGGTAGACATGACCCAAAAGAATTACTTAGAAGACGCCTTTACCACCTTTGAAAA
GCGTTTAAATGAATTCGAAAATTTGATTAATCAACTTTAA
ATGGCTATTCCAACTAGAGATGAAGTAGCACAAGATCTAAAATGGGATTTGAGCGGTGTTTTTGAAAATGATGCAGCTTG
GGAGAAAGAATACCAGGCTATTAATGAAGCTATTCCTAACTTAGCAAAGTTAAAAGGTAGCCTAGTACAATCTGGGCAAA
AGTTATATGAAGGCATAACAAAAATTTTAAATATTGAGCGCAAATTAGAAAGGGTATACGTTTATGCCACTATGTCTAGC
GACGTAGATACTAGTAACACCAAATATTTAGGATATGTGGCTAAGGCTCAAGCTTTGCTTAGTAATTTCTCAGCGGCTAC
TTCATTCGTAGATCCTGAAATTTTGAGTATTCCAGCTGCCGAATTAGACAAATATATGGTAGACGAACCTAGACTAAAAG
ATTATGCACATCGCATTGAAACAGTAACCAATAAGCGATCACATACCTTGCCTGCAGCCCAAGAAAAAATTATTGCAGCT
GCTCAAAATGCTTTAGAAAGTTCAGCTAATACTTTTAATGTTTTAACCAACTCAGATATTCAATTTGGTTTTACTCAAGA
TGACAATGGGGAAATGGTTCAACTTTCCGATGGACTTTACTCACTTTTAATTCAATCACAAGATCGCAACGTACGAAAAA
ATGCTTTTGAGACAATGTATGATGCTTACGGTCAATTTCAGAATTCCCTTGCTTCTACCTTAGCCGGTACAACTAAACAA
CATAATTTTGATGCAAAAATGCATAAATATCACTCTGCTCGTGAAGACGCACTAAGTAATAATAATATTCCAACTGAGGT
TTATGATAATTTAATTGAAGAAGTTAACAAACATTTAGATTTACTTCATCGCTATGTTGCTTTACGAAAAAAGATTTTAA
ATTTACCTGATCTCCAAATGTACGACATGTATGTACCTCTCACTGGAGAACCAGCTTTATCTTACAATTTTGAAGAAGCA
AAAATTGAAGCTAAAAAAGCTCTTCTTCCTTTGGGGGAAGATTACCTAAAACATGTAGATTATATTTTCAATAATCGGGT
AATCGATGTAGTTGAATCACAAAACAAAGTTACCGGTGCATATTCAGGTGGCTCTTATGATACTGATCCTTACGAACTAT
TAAACTGGGAAAACAATTTAGACTCCCTCTTTACTTTAGTTCATGAAACAGGTCACTCAGTTCATTCTTGGTACACTCGT
CATACTCAACCTTTTATTTATGGTGATTATCCAATTTTTGTAGCAGAAATTGCTTCAACCACAAATGAAAATATTCTAAC
TGAATATTTCTTAGATAAAATCACTGAACCTAAAACAAGAGCATTCATTTTGAATCACTACTTAGATTCGTTTAAGGGTA
CTTTATTCCGCCAAACTCAATTTGCTGAATTTGAACAATTTATTCATGAAACTGATGCTCAAGGTGCTCCTTTAACTGCA
GAAGTTTTAAGCGATTATTATAGCCGACTAAATCAAAAATATTATGGCGATAGCGTCGAACCAGGTGGAGATATTGCCTT
GGAATGGGCTCGTATCCCTCACTTTTATTACAACTTTTATGTTTACCAATACGCTACTGGTTTTGCTGCAGCTACTGCCC
TAGCAAATAAAATTGTTCATGGAACTCCTGAACAAACGCAAGCTTACATTGATTTTCTAAAAGCTGGATCTAGTGACTAC
CCAATTGAAATTATGAAAAAAGCAGGGGTAGACATGACCCAAAAGAATTACTTAGAAGACGCCTTTACCACCTTTGAAAA
GCGTTTAAATGAATTCGAAAATTTGATTAATCAACTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
50.505 |
99.165 |
0.501 |