Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   FPL17_RS11680 Genome accession   NZ_CP041970
Coordinates   2559666..2560553 (-) Length   295 a.a.
NCBI ID   WP_159885201.1    Uniprot ID   -
Organism   Acinetobacter dispersus strain NCCP 16014     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2554666..2565553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL17_RS11660 (FPL17_11805) - 2555193..2556269 (+) 1077 WP_032857438.1 PhoH family protein -
  FPL17_RS11665 (FPL17_11810) ybeY 2556341..2556826 (+) 486 WP_159885199.1 rRNA maturation RNase YbeY -
  FPL17_RS11670 (FPL17_11815) - 2556838..2557137 (+) 300 WP_005192273.1 antibiotic biosynthesis monooxygenase family protein -
  FPL17_RS11675 (FPL17_11820) fhuE 2557209..2559377 (-) 2169 WP_151715489.1 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE -
  FPL17_RS11680 (FPL17_11825) tonB2 2559666..2560553 (-) 888 WP_159885201.1 energy transducer TonB Machinery gene
  FPL17_RS11685 (FPL17_11830) - 2560797..2561477 (+) 681 WP_159885203.1 hypothetical protein -
  FPL17_RS11690 (FPL17_11835) - 2561669..2562373 (+) 705 WP_005192263.1 DUF3108 domain-containing protein -
  FPL17_RS11695 (FPL17_11840) - 2562462..2563037 (+) 576 WP_151715492.1 xanthine phosphoribosyltransferase -
  FPL17_RS11700 (FPL17_11845) - 2563087..2563911 (-) 825 WP_159885205.1 YwqG family protein -
  FPL17_RS11705 (FPL17_11850) thyA 2564084..2564926 (+) 843 WP_005192259.1 thymidylate synthase -
  FPL17_RS11710 (FPL17_11855) - 2564949..2565458 (+) 510 WP_159885207.1 dihydrofolate reductase -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 33549.25 Da        Isoelectric Point: 9.1150

>NTDB_id=375077 FPL17_RS11680 WP_159885201.1 2559666..2560553(-) (tonB2) [Acinetobacter dispersus strain NCCP 16014]
MWNKINFRSELSPYWWQDPIFVGAVALAMLLHGAVLAIQFAMPSPSDTSTKEIAVTVRPSQEKVKDADFLAQADQQGSGD
FREAHRMSSDMPSPMQADATTGEKELESLEKVQQKRELKFEEKVLMTVLSWQKQAEQSERKKTLDDLQSQFQAKAAMVAS
LEAQYLQRQQNFSRKQRIKTVDGIQAKQDASATYLDKFRQKVELYGNRYYPDQAKQQHLAGEVRLMVILNAEGGIRAIRL
IESSGHAILDEAAKASVRRGAPFGPFDAKMKKVISELRIIRTWRFDPIDAEFEVH

Nucleotide


Download         Length: 888 bp        

>NTDB_id=375077 FPL17_RS11680 WP_159885201.1 2559666..2560553(-) (tonB2) [Acinetobacter dispersus strain NCCP 16014]
ATGTGGAATAAAATTAATTTTCGTTCAGAACTGTCTCCTTATTGGTGGCAAGATCCAATTTTTGTTGGGGCAGTGGCTTT
GGCGATGCTTTTGCATGGCGCGGTGTTGGCTATTCAATTTGCAATGCCATCACCATCTGACACTTCGACTAAAGAAATTG
CGGTGACAGTTCGTCCGAGTCAGGAAAAAGTCAAAGATGCGGACTTCTTGGCACAAGCTGATCAACAAGGTTCTGGTGAT
TTCCGCGAAGCACATCGTATGTCAAGTGATATGCCATCACCGATGCAGGCGGATGCGACAACAGGTGAAAAAGAGCTAGA
AAGTCTGGAAAAAGTTCAGCAAAAACGTGAACTAAAATTTGAAGAAAAAGTTTTAATGACTGTTTTGAGTTGGCAAAAGC
AAGCAGAGCAGAGCGAACGAAAAAAGACCTTGGATGATTTACAAAGCCAATTTCAAGCCAAAGCTGCAATGGTGGCAAGC
TTGGAAGCACAATATCTGCAACGCCAACAAAACTTTAGCCGCAAACAACGCATTAAAACCGTTGATGGGATTCAGGCTAA
ACAAGATGCGTCTGCGACTTACTTAGATAAGTTTCGTCAAAAAGTTGAACTTTATGGCAACCGTTATTATCCAGATCAAG
CAAAACAGCAGCATTTAGCGGGTGAAGTCCGTTTGATGGTGATTTTGAATGCCGAAGGTGGAATTCGAGCTATTCGTCTT
ATCGAAAGTTCTGGACATGCAATTTTGGATGAAGCCGCTAAGGCATCAGTACGCCGTGGTGCACCATTTGGACCTTTCGA
TGCCAAGATGAAAAAAGTCATTTCTGAGTTACGTATCATTCGTACATGGCGTTTTGATCCTATCGATGCAGAGTTTGAAG
TGCACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-277)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

79.078

95.593

0.756

Multiple sequence alignment