Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FPL17_RS04190 | Genome accession | NZ_CP041970 |
| Coordinates | 957323..957676 (+) | Length | 117 a.a. |
| NCBI ID | WP_266095748.1 | Uniprot ID | - |
| Organism | Acinetobacter dispersus strain NCCP 16014 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 952323..962676
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPL17_RS04160 (FPL17_04210) | - | 953097..953402 (+) | 306 | WP_159883448.1 | hypothetical protein | - |
| FPL17_RS04165 (FPL17_04215) | - | 953565..954074 (+) | 510 | WP_159883450.1 | hypothetical protein | - |
| FPL17_RS04170 (FPL17_04220) | - | 954676..955020 (+) | 345 | WP_005187977.1 | PilZ domain-containing protein | - |
| FPL17_RS04175 (FPL17_04225) | - | 955045..955818 (+) | 774 | WP_159883452.1 | TatD family hydrolase | - |
| FPL17_RS04180 (FPL17_04230) | - | 955859..956467 (+) | 609 | WP_032857741.1 | TetR/AcrR family transcriptional regulator | - |
| FPL17_RS04185 (FPL17_04235) | - | 956479..957027 (+) | 549 | WP_005187985.1 | pilus assembly FimT family protein | - |
| FPL17_RS04190 (FPL17_04240) | xcpV | 957323..957676 (+) | 354 | WP_266095748.1 | type II secretion system protein | Machinery gene |
| FPL17_RS04195 (FPL17_04245) | xcpW | 957673..958383 (+) | 711 | WP_159883456.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FPL17_RS04200 (FPL17_04250) | gspK | 958340..959374 (+) | 1035 | WP_171519510.1 | type II secretion system minor pseudopilin GspK | - |
| FPL17_RS04205 (FPL17_04255) | - | 959482..960078 (+) | 597 | WP_159883458.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| FPL17_RS04210 (FPL17_04260) | ung | 960123..960836 (+) | 714 | WP_005188001.1 | uracil-DNA glycosylase | - |
| FPL17_RS04215 (FPL17_04265) | - | 960833..961957 (+) | 1125 | WP_171067238.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FPL17_RS04220 (FPL17_04270) | tadA | 961963..962472 (+) | 510 | WP_151715218.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 117 a.a. Molecular weight: 13013.01 Da Isoelectric Point: 9.9652
>NTDB_id=375067 FPL17_RS04190 WP_266095748.1 957323..957676(+) (xcpV) [Acinetobacter dispersus strain NCCP 16014]
MVALAIFAVAAIALTKVAMQYTQSTSNAILRTKAQFVGMNEVAMMEINQEWLEGTQSKQVTSQGETWKIDKKAQSTISPK
IQRIELQVSLFNNEQGKVEAGITNLVFFNYPAKARTQ
MVALAIFAVAAIALTKVAMQYTQSTSNAILRTKAQFVGMNEVAMMEINQEWLEGTQSKQVTSQGETWKIDKKAQSTISPK
IQRIELQVSLFNNEQGKVEAGITNLVFFNYPAKARTQ
Nucleotide
Download Length: 354 bp
>NTDB_id=375067 FPL17_RS04190 WP_266095748.1 957323..957676(+) (xcpV) [Acinetobacter dispersus strain NCCP 16014]
ATGGTGGCCTTGGCGATCTTTGCGGTTGCGGCAATTGCCTTAACTAAAGTTGCCATGCAGTACACACAGTCAACATCCAA
TGCGATCTTGCGGACCAAAGCACAATTTGTGGGAATGAATGAAGTCGCAATGATGGAAATTAATCAGGAATGGTTGGAAG
GAACGCAATCAAAGCAAGTCACCTCTCAAGGTGAAACCTGGAAAATTGACAAAAAAGCCCAATCCACCATTAGCCCCAAG
ATACAGCGTATCGAATTGCAAGTCAGCTTATTTAATAATGAGCAAGGTAAGGTTGAGGCGGGTATTACCAATCTTGTGTT
CTTTAACTATCCAGCAAAGGCTAGAACACAATGA
ATGGTGGCCTTGGCGATCTTTGCGGTTGCGGCAATTGCCTTAACTAAAGTTGCCATGCAGTACACACAGTCAACATCCAA
TGCGATCTTGCGGACCAAAGCACAATTTGTGGGAATGAATGAAGTCGCAATGATGGAAATTAATCAGGAATGGTTGGAAG
GAACGCAATCAAAGCAAGTCACCTCTCAAGGTGAAACCTGGAAAATTGACAAAAAAGCCCAATCCACCATTAGCCCCAAG
ATACAGCGTATCGAATTGCAAGTCAGCTTATTTAATAATGAGCAAGGTAAGGTTGAGGCGGGTATTACCAATCTTGTGTT
CTTTAACTATCCAGCAAAGGCTAGAACACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
82.609 |
98.291 |
0.812 |