Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FPL17_RS03555 Genome accession   NZ_CP041970
Coordinates   847428..848384 (+) Length   318 a.a.
NCBI ID   WP_159883295.1    Uniprot ID   -
Organism   Acinetobacter dispersus strain NCCP 16014     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 842428..853384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL17_RS03535 (FPL17_03580) - 842925..844049 (+) 1125 WP_159883287.1 putative phage abortive infection protein -
  FPL17_RS03540 (FPL17_03585) - 844118..844339 (+) 222 WP_159883289.1 hypothetical protein -
  FPL17_RS03545 (FPL17_03590) - 844424..845881 (-) 1458 WP_159883291.1 DASS family sodium-coupled anion symporter -
  FPL17_RS03550 (FPL17_03595) - 846152..847135 (+) 984 WP_159883293.1 ion transporter -
  FPL17_RS03555 (FPL17_03600) ceuB 847428..848384 (+) 957 WP_159883295.1 ABC transporter permease Machinery gene
  FPL17_RS03560 (FPL17_03605) - 848374..849330 (+) 957 WP_159883297.1 iron chelate uptake ABC transporter family permease subunit -
  FPL17_RS03565 (FPL17_03610) - 849321..850085 (+) 765 WP_159883299.1 ABC transporter ATP-binding protein -
  FPL17_RS03570 (FPL17_03615) - 850095..851048 (+) 954 WP_159883301.1 siderophore ABC transporter substrate-binding protein -
  FPL17_RS03575 (FPL17_03620) - 851142..851750 (+) 609 WP_159883303.1 DUF2238 domain-containing protein -
  FPL17_RS03580 (FPL17_03625) - 851774..852994 (-) 1221 WP_159883305.1 MFS transporter -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34773.86 Da        Isoelectric Point: 9.6567

>NTDB_id=375066 FPL17_RS03555 WP_159883295.1 847428..848384(+) (ceuB) [Acinetobacter dispersus strain NCCP 16014]
MIKRRYLILLLLPLAFISLFVGVGDMSLDGLWAGNPQDWQLFWTSRLPRLMAIIVAGAGLSVCGLIMQSLSRNRFVSPTT
AGLYDCARLGVLVSIILLPSASIFVKTGFAITVTLIGAMAFMSILATLKHRDTVFVPLVGMIFGSIISAFTTFIALQMDL
LQNLAGWLQGDFSTILNGQYELIYLSVPVLILIYIFANRFVLAGLGQDFATNLGLNYKQTLFLGLLLVSVITGVVIVTVG
AIPFLGLIVPNLVSLYLGDNIRRTLSHTALLGALLVLLCDVFGRVVIYPYEVSVSLIMGVVGSVIFLWLLLRRYRYAT

Nucleotide


Download         Length: 957 bp        

>NTDB_id=375066 FPL17_RS03555 WP_159883295.1 847428..848384(+) (ceuB) [Acinetobacter dispersus strain NCCP 16014]
ATGATTAAGCGGCGTTATCTAATTTTATTATTGCTTCCACTGGCATTTATTTCTTTATTTGTCGGTGTAGGAGACATGAG
TCTTGATGGTTTGTGGGCAGGCAATCCACAGGACTGGCAATTGTTCTGGACCAGCCGTTTACCACGTCTCATGGCAATTA
TTGTGGCAGGTGCGGGCCTGAGTGTCTGTGGCTTGATTATGCAATCACTTAGCCGCAATCGTTTTGTTTCCCCAACCACA
GCAGGTTTGTATGACTGTGCACGTTTAGGCGTACTGGTTTCGATTATCTTGCTGCCGAGTGCTTCAATCTTTGTGAAAAC
TGGTTTTGCCATAACTGTGACACTGATCGGGGCAATGGCCTTTATGAGCATTTTGGCGACCCTCAAGCATCGAGATACCG
TCTTTGTTCCGCTGGTGGGGATGATTTTCGGCAGTATTATTTCAGCCTTTACCACTTTTATTGCCTTGCAAATGGATCTA
TTGCAGAACTTGGCAGGGTGGTTGCAAGGAGACTTTTCGACCATTTTAAATGGCCAATATGAGCTGATCTATCTCAGTGT
TCCTGTCTTGATTCTGATCTATATCTTTGCCAATCGTTTTGTCTTGGCAGGCTTGGGACAGGATTTTGCCACCAATCTTG
GACTGAATTATAAACAGACCTTATTTCTTGGCTTGTTATTGGTCTCGGTGATTACTGGTGTGGTGATTGTGACCGTTGGC
GCGATTCCTTTTCTTGGCCTGATCGTACCGAATTTGGTTAGCTTATATCTAGGTGACAATATCCGTCGAACCTTATCACA
TACTGCATTACTTGGCGCTTTGTTGGTTCTACTCTGTGATGTATTTGGCCGAGTGGTGATTTATCCCTATGAGGTGTCGG
TGAGTCTAATTATGGGTGTGGTGGGAAGTGTAATTTTCCTGTGGTTATTACTCAGGAGATATCGTTATGCCACATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.521

98.428

0.487

Multiple sequence alignment