Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FPL13_RS06565 Genome accession   NZ_CP041968
Coordinates   1357823..1358533 (+) Length   236 a.a.
NCBI ID   WP_049512453.1    Uniprot ID   A0A7L8W6T3
Organism   Streptococcus sp. KS 6     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1352823..1363533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL13_RS06555 (FPL13_06640) treC 1353795..1355426 (-) 1632 WP_049512457.1 alpha,alpha-phosphotrehalase -
  FPL13_RS06560 (FPL13_06645) treP 1355634..1357643 (-) 2010 WP_049512455.1 PTS system trehalose-specific EIIBC component -
  FPL13_RS06565 (FPL13_06650) treR 1357823..1358533 (+) 711 WP_049512453.1 trehalose operon repressor Regulator
  FPL13_RS06570 (FPL13_06655) - 1358685..1360025 (-) 1341 WP_049512450.1 hemolysin family protein -
  FPL13_RS06575 (FPL13_06660) - 1360114..1361763 (-) 1650 WP_049512448.1 phosphoenolpyruvate carboxykinase (ATP) -
  FPL13_RS06580 (FPL13_06665) - 1362015..1363138 (-) 1124 Protein_1308 AI-2E family transporter -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27525.61 Da        Isoelectric Point: 9.4591

>NTDB_id=375015 FPL13_RS06565 WP_049512453.1 1357823..1358533(+) (treR) [Streptococcus sp. KS 6]
MKKYEQIFKLLEQDILNEKYQMNDYLPSEHELVQTYKVSRDTIRKSLDLLQKAGLIQKMRGQGSKVIQQEQIDFPVSNLT
SYQELVRQHGMNSKTNVIQLEKITVDKKLSSLTGFPEYRLVWRIIRQRVVDGIASVLDIDYLDKSFVPSISREIAEHSIY
AYLEGELGLHIAYAQKEITIDPATNRDKILMSIGNDHHVVSVKSKVYLADGQQFQFTDSRHKLEKFRFVDFAKRQK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=375015 FPL13_RS06565 WP_049512453.1 1357823..1358533(+) (treR) [Streptococcus sp. KS 6]
ATGAAAAAATATGAACAAATTTTTAAACTCTTAGAACAAGATATTCTAAACGAGAAATATCAGATGAATGATTATCTTCC
TAGCGAACACGAACTTGTCCAGACCTACAAGGTCAGCCGTGACACGATTCGTAAATCGCTTGATTTGCTTCAAAAAGCTG
GTCTCATTCAAAAAATGAGAGGTCAAGGCTCCAAAGTCATCCAACAAGAACAGATTGACTTTCCCGTTTCCAACCTAACT
AGTTACCAAGAACTTGTCCGGCAACATGGAATGAATTCTAAAACCAATGTCATCCAGTTAGAAAAAATTACAGTTGATAA
AAAATTATCCAGTCTTACTGGTTTTCCTGAATACCGTCTGGTGTGGCGGATTATTCGCCAAAGGGTCGTCGACGGGATTG
CCTCCGTCTTAGATATTGATTACCTTGATAAGAGTTTTGTCCCTTCTATTAGCCGTGAAATTGCAGAGCATTCAATTTAT
GCTTATTTAGAAGGTGAACTGGGGCTACACATTGCTTACGCCCAAAAAGAAATCACAATTGATCCAGCTACCAATCGCGA
TAAAATATTGATGAGCATTGGAAATGACCACCATGTCGTCTCTGTCAAATCAAAAGTCTATCTCGCAGACGGACAGCAAT
TTCAGTTTACAGATAGTCGTCATAAACTCGAAAAATTCCGTTTCGTTGACTTTGCCAAGCGGCAAAAATGA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L8W6T3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

65.678

100

0.657

Multiple sequence alignment