Detailed information    

insolico Bioinformatically predicted

Overview


Name   scnK   Type   Regulator
Locus tag   FPL13_RS03770 Genome accession   NZ_CP041968
Coordinates   763187..764497 (+) Length   436 a.a.
NCBI ID   WP_021001669.1    Uniprot ID   A0AAP6BNP2
Organism   Streptococcus sp. KS 6     
Function   regulate comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 758187..769497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL13_RS03750 (FPL13_03795) - 759952..760680 (-) 729 WP_049513302.1 ABC transporter permease -
  FPL13_RS03755 (FPL13_03800) - 760677..761417 (-) 741 WP_003024586.1 ABC transporter permease -
  FPL13_RS03760 (FPL13_03805) - 761417..762325 (-) 909 WP_049513303.1 ABC transporter ATP-binding protein -
  FPL13_RS03765 (FPL13_03810) scnR 762497..763186 (+) 690 WP_049513304.1 response regulator transcription factor Regulator
  FPL13_RS03770 (FPL13_03815) scnK 763187..764497 (+) 1311 WP_021001669.1 sensor histidine kinase Regulator
  FPL13_RS03775 (FPL13_03820) nox 764794..766167 (-) 1374 WP_049513305.1 H2O-forming NADH oxidase -
  FPL13_RS03780 (FPL13_03825) - 766453..767382 (+) 930 WP_318630706.1 FAD:protein FMN transferase -
  FPL13_RS03785 (FPL13_03830) - 767402..768010 (+) 609 WP_049513309.1 NADPH-dependent FMN reductase -
  FPL13_RS03790 (FPL13_03835) - 768030..769274 (+) 1245 WP_192208659.1 NAD(P)H-dependent oxidoreductase -

Sequence


Protein


Download         Length: 436 a.a.        Molecular weight: 50020.82 Da        Isoelectric Point: 8.2547

>NTDB_id=375006 FPL13_RS03770 WP_021001669.1 763187..764497(+) (scnK) [Streptococcus sp. KS 6]
MDTVKFFTKLLTRYVLLLLALIIGLVFVYGLVFSSYFSFYGKEKPELLYTKIAQSSQQNNFNFDKSSKIEMDKQNTWAMV
LNQDGNIVQSYHLPQQLKRHYTNADMVKFSRWYLEDYPVFSYVRGQQILVLGYPKKHSLAKFNFYANTQFIRNFLSLGLV
FLGIILLLIFILLSRSKLRIKKEMDPIITAVTSLSQGQNIALNEKGNFSEIKTALNETSHILEESNTMKEQWIRGVSHDL
RNPLMLISGYNSQLEQQYGKGKQTEEIENQIQTMKEMISNLNMSYLLDNQKHHSEFSSLDLVAVLRTVIADILNNYETIT
LHFDLPTEAVLVKGEVTLLERAFRNLLLNSIIHSGSNQIDLTYQLSDNKVLIIIADQGDITAQKITELNQKSTNYESHGM
GTVITKQIIKLHQGEIVFLDNQPGLKVIISLPLVKD

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=375006 FPL13_RS03770 WP_021001669.1 763187..764497(+) (scnK) [Streptococcus sp. KS 6]
ATGGATACCGTTAAATTTTTTACTAAGTTATTAACCAGGTATGTTCTATTACTCTTGGCTTTAATCATAGGACTTGTTTT
TGTTTATGGTTTGGTTTTCTCATCCTATTTTAGTTTCTATGGAAAGGAAAAACCGGAACTACTTTACACTAAAATCGCTC
AATCGAGTCAACAGAATAATTTTAATTTTGATAAAAGCAGCAAAATTGAAATGGATAAACAAAATACTTGGGCTATGGTA
CTGAATCAAGATGGCAATATTGTCCAATCTTATCATTTACCTCAACAGCTCAAAAGACATTATACCAATGCTGATATGGT
TAAATTTTCACGTTGGTATTTAGAAGATTACCCTGTTTTCTCCTATGTACGAGGTCAGCAAATTTTAGTTTTGGGCTATC
CTAAAAAGCATTCCTTAGCAAAATTTAATTTCTATGCTAATACACAATTTATTAGGAATTTTCTCAGTTTGGGACTTGTT
TTCTTGGGTATTATTCTTTTACTTATTTTTATTCTTTTGAGCCGATCAAAGCTACGCATTAAAAAGGAAATGGATCCGAT
TATTACTGCTGTCACTTCTTTGTCTCAGGGTCAAAATATTGCTCTTAATGAAAAGGGAAATTTCTCAGAAATTAAGACAG
CCCTTAATGAAACATCTCATATTTTGGAAGAAAGCAACACGATGAAAGAGCAATGGATTAGAGGGGTCAGTCATGATTTA
CGCAATCCTCTTATGCTCATATCAGGTTATAACAGTCAGCTAGAGCAGCAATATGGTAAAGGAAAGCAGACGGAGGAAAT
TGAAAATCAGATTCAAACTATGAAAGAAATGATTTCTAATCTCAATATGAGCTACTTATTGGATAATCAAAAGCATCACT
CCGAATTTTCGAGTCTTGATTTGGTTGCAGTCCTACGAACAGTAATTGCCGATATATTGAATAATTATGAAACAATTACA
CTTCATTTTGATTTGCCTACCGAGGCAGTGTTGGTAAAAGGAGAGGTAACTTTACTAGAAAGAGCTTTTAGAAATCTCTT
GCTTAATAGTATCATACACAGCGGTTCTAACCAGATTGATCTGACTTATCAATTATCTGATAATAAAGTGCTCATCATCA
TTGCGGATCAAGGAGATATTACAGCTCAAAAAATTACTGAGCTAAATCAAAAATCAACTAATTATGAATCACATGGTATG
GGAACGGTTATCACTAAACAAATTATTAAATTACATCAAGGTGAAATTGTTTTTTTAGACAATCAGCCAGGCTTAAAAGT
CATCATTTCTTTACCTTTAGTAAAGGACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  scnK Streptococcus mutans UA159

83.486

100

0.835


Multiple sequence alignment