Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   G8B37_RS03400 Genome accession   NZ_CP049695
Coordinates   659078..659260 (+) Length   60 a.a.
NCBI ID   WP_011528776.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain ABC76     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 654078..664260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8B37_RS03370 (G8B37_03385) - 654199..654831 (+) 633 WP_011528779.1 hypothetical protein -
  G8B37_RS03375 (G8B37_03390) - 654843..655115 (+) 273 WP_011017397.1 hypothetical protein -
  G8B37_RS03380 (G8B37_03395) - 655112..655339 (+) 228 WP_003058873.1 phage holin -
  G8B37_RS03385 (G8B37_03400) - 655458..656675 (+) 1218 WP_011528778.1 peptidoglycan amidohydrolase family protein -
  G8B37_RS03390 (G8B37_03405) - 656811..657935 (+) 1125 WP_002988467.1 Fic family protein -
  G8B37_RS03395 (G8B37_03410) entC3 658183..658965 (+) 783 WP_002988472.1 enterotoxin type C3 EntC3 -
  G8B37_RS03400 (G8B37_03415) prx 659078..659260 (+) 183 WP_011528776.1 hypothetical protein Regulator
  G8B37_RS03405 (G8B37_03420) - 659791..661653 (+) 1863 WP_011528775.1 heavy metal translocating P-type ATPase -
  G8B37_RS03410 (G8B37_03425) - 661725..661898 (+) 174 WP_002989134.1 hypothetical protein -
  G8B37_RS03415 (G8B37_03430) - 661953..662888 (-) 936 WP_021299339.1 dihydroorotate oxidase -
  G8B37_RS03420 (G8B37_03435) - 663127..663822 (+) 696 WP_002983928.1 phosphoglycerate mutase -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6840.81 Da        Isoelectric Point: 4.7023

>NTDB_id=374976 G8B37_RS03400 WP_011528776.1 659078..659260(+) (prx) [Streptococcus pyogenes strain ABC76]
MLTYNEFKQAIDNGYIAGDTVAIVRKDGQIFDYVLPHEKVKNGEVVTKEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=374976 G8B37_RS03400 WP_011528776.1 659078..659260(+) (prx) [Streptococcus pyogenes strain ABC76]
ATGCTAACATACAACGAGTTTAAGCAAGCGATTGACAATGGATATATCGCAGGCGATACAGTAGCGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACTAAGGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

98.333

100

0.983

  prx Streptococcus pyogenes MGAS315

83.333

100

0.833

  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

71.667

100

0.717

  prx Streptococcus pyogenes MGAS315

87.805

68.333

0.6

  prx Streptococcus pyogenes MGAS315

81.395

71.667

0.583

  prx Streptococcus pyogenes MGAS315

76.19

70

0.533


Multiple sequence alignment