Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FPL04_RS15625 Genome accession   NZ_CP041965
Coordinates   3567063..3567464 (-) Length   133 a.a.
NCBI ID   WP_024711139.1    Uniprot ID   A0A855JH23
Organism   Xanthomonas arboricola strain SL2098     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3562063..3572464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL04_RS15610 (FPL04_15610) - 3564071..3566113 (-) 2043 WP_154832443.1 methyl-accepting chemotaxis protein -
  FPL04_RS15615 (FPL04_15615) - 3566153..3566683 (-) 531 WP_003482487.1 chemotaxis protein CheW -
  FPL04_RS15620 (FPL04_15620) - 3566683..3567045 (-) 363 WP_024940328.1 response regulator -
  FPL04_RS15625 (FPL04_15625) pilG 3567063..3567464 (-) 402 WP_024711139.1 twitching motility response regulator PilG Regulator
  FPL04_RS15630 (FPL04_15630) gshB 3567703..3568653 (+) 951 WP_024940329.1 glutathione synthase -
  FPL04_RS15635 (FPL04_15635) - 3568650..3569525 (+) 876 WP_047124775.1 energy transducer TonB -
  FPL04_RS15640 (FPL04_15640) - 3569611..3570525 (-) 915 WP_154832444.1 ADP-ribosylglycohydrolase family protein -
  FPL04_RS15645 (FPL04_15645) tsaB 3570522..3571241 (-) 720 WP_154832445.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14681.06 Da        Isoelectric Point: 6.9539

>NTDB_id=374947 FPL04_RS15625 WP_024711139.1 3567063..3567464(-) (pilG) [Xanthomonas arboricola strain SL2098]
MTENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=374947 FPL04_RS15625 WP_024711139.1 3567063..3567464(-) (pilG) [Xanthomonas arboricola strain SL2098]
ATGACAGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAGACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGCTGTGAAGTAGTGACAGCGACCGATGGTTTCGAGGCACTGGCCAAGATTG
CCGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGGTACCAGACATGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATTCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A855JH23

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment