Detailed information NTG0374331

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: FOV14_RS17555
• Genome accession: NZ_CP041784
• Coordinates: 3585257..3586402 (+)
• Length: 381 a.a.
• NCBI ID: WP_076983500.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain IM1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3580257..3591402

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOV14_RS17535 (FOV14_17690)	-	3580732..3581448 (-)	717	WP_003151075.1	Crp/Fnr family transcriptional regulator	-
FOV14_RS17540 (FOV14_17695)	narK	3581546..3582736 (-)	1191	WP_003151073.1	nitrate transporter NarK	-
FOV14_RS17545 (FOV14_17700)	argS	3582870..3584540 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
FOV14_RS17550 (FOV14_17705)	-	3584537..3584965 (-)	429	WP_003151069.1	DUF1934 family protein	-
FOV14_RS17555 (FOV14_17710)	rapF	3585257..3586402 (+)	1146	WP_076983500.1	tetratricopeptide repeat protein	Regulator
FOV14_RS17560 (FOV14_17715)	-	3586386..3586505 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
FOV14_RS17565 (FOV14_17720)	speB	3586628..3587500 (-)	873	WP_003151054.1	agmatinase	-
FOV14_RS17570 (FOV14_17725)	speE	3587560..3588390 (-)	831	WP_003151052.1	spermidine synthase	-
FOV14_RS17575 (FOV14_17730)	-	3588590..3590662 (+)	2073	WP_240679851.1	transglycosylase domain-containing protein	-
FOV14_RS17580 (FOV14_17735)	-	3590686..3591117 (-)	432	WP_057080300.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45809.36 Da
• Isoelectric Point: 5.2539

>NTDB_id=374331 FOV14_RS17555 WP_076983500.1 3585257..3586402(+) (rapF) [Bacillus velezensis strain IM1]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMARLEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=374331 FOV14_RS17555 WP_076983500.1 3585257..3586402(+) (rapF) [Bacillus velezensis strain IM1]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTAGAT
TGGAACAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGCATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533