Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | MESIL_RS06720 | Genome accession | NC_014212 |
| Coordinates | 1320828..1321463 (-) | Length | 211 a.a. |
| NCBI ID | WP_013157798.1 | Uniprot ID | D7BEI5 |
| Organism | Allomeiothermus silvanus DSM 9946 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1315828..1326463
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MESIL_RS06705 (Mesil_1332) | - | 1316846..1319161 (-) | 2316 | WP_013157795.1 | secretin N-terminal domain-containing protein | - |
| MESIL_RS06710 (Mesil_1333) | - | 1319166..1320146 (-) | 981 | WP_013157796.1 | hypothetical protein | - |
| MESIL_RS06715 (Mesil_1334) | - | 1320143..1320838 (-) | 696 | WP_013157797.1 | type 4a pilus biogenesis protein PilO | - |
| MESIL_RS06720 (Mesil_1335) | pilN | 1320828..1321463 (-) | 636 | WP_013157798.1 | hypothetical protein | Machinery gene |
| MESIL_RS06725 (Mesil_1336) | pilM | 1321456..1322595 (-) | 1140 | WP_013157799.1 | type IV pilus assembly protein PilM | Machinery gene |
| MESIL_RS06730 (Mesil_1337) | - | 1323001..1324005 (-) | 1005 | WP_013157800.1 | isocitrate/isopropylmalate dehydrogenase family protein | - |
| MESIL_RS06735 (Mesil_1338) | - | 1324045..1324587 (-) | 543 | WP_013157801.1 | DUF5317 domain-containing protein | - |
| MESIL_RS06740 (Mesil_1339) | - | 1324605..1325996 (-) | 1392 | WP_013157802.1 | HD-GYP domain-containing protein | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23902.21 Da Isoelectric Point: 9.9209
>NTDB_id=37429 MESIL_RS06720 WP_013157798.1 1320828..1321463(-) (pilN) [Allomeiothermus silvanus DSM 9946]
MIRLNLLPKNLRRRIEPGWWRLVAILFVAAVLGIVGYLHYSAWSQLQALEDERDQLRLEVDVLRPAIREQQDLLRRQQEL
QPLEQVRTQLENRRVRWSDNIATFVNQIPRENGRFGVALRSIGASLRGQGNQPAPGGENLYDGKPVKVEFSLQGEALGQA
QLVRFIEAFESSPRFGINFQQATLDPNRGLYTFSATVGMVEAPQGGEQGAR
MIRLNLLPKNLRRRIEPGWWRLVAILFVAAVLGIVGYLHYSAWSQLQALEDERDQLRLEVDVLRPAIREQQDLLRRQQEL
QPLEQVRTQLENRRVRWSDNIATFVNQIPRENGRFGVALRSIGASLRGQGNQPAPGGENLYDGKPVKVEFSLQGEALGQA
QLVRFIEAFESSPRFGINFQQATLDPNRGLYTFSATVGMVEAPQGGEQGAR
Nucleotide
Download Length: 636 bp
>NTDB_id=37429 MESIL_RS06720 WP_013157798.1 1320828..1321463(-) (pilN) [Allomeiothermus silvanus DSM 9946]
TTGATTAGGCTCAACCTCCTCCCCAAAAACCTGCGCCGCCGGATCGAGCCCGGTTGGTGGCGGCTGGTGGCGATCCTCTT
CGTAGCGGCGGTACTGGGCATTGTAGGCTATCTGCACTATTCCGCTTGGAGCCAGCTCCAGGCCCTCGAGGACGAACGCG
ACCAGCTGCGCTTAGAGGTGGATGTACTGCGGCCTGCCATCCGCGAGCAGCAAGACCTGCTGCGCCGTCAACAAGAGCTT
CAGCCCCTCGAGCAGGTGCGGACTCAGCTGGAAAACCGCCGGGTGCGCTGGTCGGACAATATCGCCACCTTCGTCAATCA
AATCCCCCGCGAGAATGGCCGCTTCGGGGTAGCCCTGCGCAGTATCGGGGCCAGCCTGCGGGGTCAGGGGAACCAACCCG
CCCCTGGAGGCGAAAATCTCTATGACGGCAAACCGGTGAAGGTGGAGTTCAGCCTGCAGGGCGAAGCCTTGGGCCAGGCC
CAACTGGTCCGCTTCATCGAGGCCTTCGAATCCTCCCCCCGTTTCGGAATCAACTTCCAACAAGCCACCCTCGACCCAAA
CCGCGGCCTCTACACCTTTAGCGCCACCGTGGGCATGGTCGAAGCACCTCAAGGAGGTGAGCAAGGTGCTCGCTAG
TTGATTAGGCTCAACCTCCTCCCCAAAAACCTGCGCCGCCGGATCGAGCCCGGTTGGTGGCGGCTGGTGGCGATCCTCTT
CGTAGCGGCGGTACTGGGCATTGTAGGCTATCTGCACTATTCCGCTTGGAGCCAGCTCCAGGCCCTCGAGGACGAACGCG
ACCAGCTGCGCTTAGAGGTGGATGTACTGCGGCCTGCCATCCGCGAGCAGCAAGACCTGCTGCGCCGTCAACAAGAGCTT
CAGCCCCTCGAGCAGGTGCGGACTCAGCTGGAAAACCGCCGGGTGCGCTGGTCGGACAATATCGCCACCTTCGTCAATCA
AATCCCCCGCGAGAATGGCCGCTTCGGGGTAGCCCTGCGCAGTATCGGGGCCAGCCTGCGGGGTCAGGGGAACCAACCCG
CCCCTGGAGGCGAAAATCTCTATGACGGCAAACCGGTGAAGGTGGAGTTCAGCCTGCAGGGCGAAGCCTTGGGCCAGGCC
CAACTGGTCCGCTTCATCGAGGCCTTCGAATCCTCCCCCCGTTTCGGAATCAACTTCCAACAAGCCACCCTCGACCCAAA
CCGCGGCCTCTACACCTTTAGCGCCACCGTGGGCATGGTCGAAGCACCTCAAGGAGGTGAGCAAGGTGCTCGCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Thermus thermophilus HB27 |
55.45 |
100 |
0.555 |