Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   FOV14_RS01995 Genome accession   NZ_CP041784
Coordinates   420772..420891 (+) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain IM1     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 415772..425891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOV14_RS01980 (FOV14_01990) - 417384..418067 (+) 684 WP_024084885.1 response regulator transcription factor -
  FOV14_RS01985 (FOV14_01995) - 418054..419487 (+) 1434 WP_240679929.1 HAMP domain-containing sensor histidine kinase -
  FOV14_RS01990 (FOV14_02000) rapC 419640..420788 (+) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  FOV14_RS01995 (FOV14_02005) phrC 420772..420891 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  FOV14_RS02000 (FOV14_02015) - 421042..421137 (-) 96 WP_012116800.1 YjcZ family sporulation protein -
  FOV14_RS02005 (FOV14_02020) - 421232..422596 (-) 1365 WP_003156333.1 aspartate kinase -
  FOV14_RS02010 (FOV14_02025) ceuB 423011..423964 (+) 954 WP_003156332.1 ABC transporter permease Machinery gene
  FOV14_RS02015 (FOV14_02030) - 423954..424901 (+) 948 WP_003156331.1 iron chelate uptake ABC transporter family permease subunit -
  FOV14_RS02020 (FOV14_02035) - 424895..425653 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=374267 FOV14_RS01995 WP_003156334.1 420772..420891(+) (phrC) [Bacillus velezensis strain IM1]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=374267 FOV14_RS01995 WP_003156334.1 420772..420891(+) (phrC) [Bacillus velezensis strain IM1]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718

Multiple sequence alignment