Detailed information NTG0374032

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: FNS63_RS11085
• Genome accession: NZ_CP041770
• Coordinates: 2283319..2284482 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain DH8030
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2278319..2289482

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNS63_RS11055 (FNS63_11050)	-	2278584..2279003 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
FNS63_RS11060 (FNS63_11055)	comFC	2279077..2279766 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
FNS63_RS11065 (FNS63_11060)	-	2279772..2280056 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
FNS63_RS11070 (FNS63_11065)	comFA	2280114..2281499 (-)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
FNS63_RS11075 (FNS63_11070)	-	2281607..2282455 (-)	849	WP_024085866.1	DegV family protein	-
FNS63_RS11080 (FNS63_11075)	degU	2282553..2283242 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
FNS63_RS11085 (FNS63_11080)	degS	2283319..2284482 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
FNS63_RS11090 (FNS63_11085)	-	2284705..2285352 (+)	648	WP_003151384.1	YigZ family protein	-
FNS63_RS11095 (FNS63_11090)	-	2285357..2286571 (+)	1215	WP_014305930.1	LCP family protein	-
FNS63_RS11100 (FNS63_11095)	-	2286661..2287737 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
FNS63_RS11105 (FNS63_11100)	-	2287870..2289066 (-)	1197	WP_024085869.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=374032 FNS63_RS11085 WP_003151385.1 2283319..2284482(-) (degS) [Bacillus amyloliquefaciens strain DH8030]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=374032 FNS63_RS11085 WP_003151385.1 2283319..2284482(-) (degS) [Bacillus amyloliquefaciens strain DH8030]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948