Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | G6543_RS07430 | Genome accession | NZ_CP049363 |
| Coordinates | 1535681..1536787 (+) | Length | 368 a.a. |
| NCBI ID | WP_001187342.1 | Uniprot ID | A0ABX6CGL8 |
| Organism | Acinetobacter baumannii strain ATCC 17978 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1530681..1541787
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6543_RS07395 | grxD | 1531026..1531367 (-) | 342 | WP_000138830.1 | Grx4 family monothiol glutaredoxin | - |
| G6543_RS07400 | - | 1531595..1532803 (+) | 1209 | WP_000129953.1 | aspartate aminotransferase family protein | - |
| G6543_RS07405 | - | 1532854..1533285 (-) | 432 | WP_000156920.1 | CBS domain-containing protein | - |
| G6543_RS07410 | - | 1533426..1533800 (-) | 375 | WP_001087274.1 | DUF2750 domain-containing protein | - |
| G6543_RS07415 | - | 1534338..1534571 (-) | 234 | WP_000616034.1 | hypothetical protein | - |
| G6543_RS07420 | - | 1534787..1535146 (+) | 360 | WP_000185571.1 | hypothetical protein | - |
| G6543_RS07425 | - | 1535247..1535573 (+) | 327 | WP_000955083.1 | hypothetical protein | - |
| G6543_RS07430 | pilA | 1535681..1536787 (+) | 1107 | WP_001187342.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| G6543_RS07435 | - | 1536977..1537573 (+) | 597 | WP_000102943.1 | nitroreductase family protein | - |
| G6543_RS07440 | - | 1537799..1538470 (+) | 672 | WP_000175350.1 | DUF2057 domain-containing protein | - |
| G6543_RS07445 | - | 1538543..1539067 (+) | 525 | WP_000593801.1 | GNAT family N-acetyltransferase | - |
| G6543_RS07450 | - | 1539080..1539379 (-) | 300 | WP_085916945.1 | cyd operon YbgE family protein | - |
| G6543_RS07455 | cydX | 1539380..1539481 (-) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| G6543_RS07460 | cydB | 1539495..1540640 (-) | 1146 | WP_000575152.1 | cytochrome d ubiquinol oxidase subunit II | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39919.72 Da Isoelectric Point: 4.9872
>NTDB_id=373914 G6543_RS07430 WP_001187342.1 1535681..1536787(+) (pilA) [Acinetobacter baumannii strain ATCC 17978]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
Nucleotide
Download Length: 1107 bp
>NTDB_id=373914 G6543_RS07430 WP_001187342.1 1535681..1536787(+) (pilA) [Acinetobacter baumannii strain ATCC 17978]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.038 |
86.685 |
0.451 |