Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   M301_RS08355 Genome accession   NC_014207
Coordinates   1831098..1831478 (-) Length   126 a.a.
NCBI ID   WP_049770018.1    Uniprot ID   -
Organism   Methylotenera versatilis 301     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1826098..1836478
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M301_RS08340 (M301_1635) - 1828327..1830087 (-) 1761 WP_013148327.1 methyl-accepting chemotaxis protein -
  M301_RS08345 (M301_1636) - 1830163..1830696 (-) 534 WP_013148328.1 chemotaxis protein CheW -
  M301_RS08350 (M301_1637) - 1830730..1831095 (-) 366 WP_013148329.1 response regulator -
  M301_RS08355 (M301_1638) pilG 1831098..1831478 (-) 381 WP_049770018.1 response regulator Regulator
  M301_RS08360 (M301_1639) - 1831874..1833025 (+) 1152 WP_041359967.1 FIST signal transduction protein -
  M301_RS08365 (M301_1640) tpx 1833177..1833680 (+) 504 WP_013148332.1 thiol peroxidase -
  M301_RS08370 (M301_1641) - 1833773..1834273 (-) 501 WP_013148333.1 aminoacyl-tRNA deacylase -
  M301_RS08375 (M301_1642) - 1834305..1834658 (-) 354 WP_013148334.1 nucleotide pyrophosphohydrolase -
  M301_RS08380 (M301_1643) - 1834651..1835811 (-) 1161 WP_013148335.1 THUMP domain-containing class I SAM-dependent RNA methyltransferase -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 14079.06 Da        Isoelectric Point: 5.1729

>NTDB_id=37391 M301_RS08355 WP_049770018.1 1831098..1831478(-) (pilG) [Methylotenera versatilis 301]
MVIDDSNTIRRSAEIFLKNSGCSVILAEDGFDALAKISNEHPDIIFVDIMMPRLDGYQTCSLIKRNARYKSTPVIMLSSK
DGLFDRARGRMVGSDQYLTKPFTQETLIDAVQTYAAISRANPQEAE

Nucleotide


Download         Length: 381 bp        

>NTDB_id=37391 M301_RS08355 WP_049770018.1 1831098..1831478(-) (pilG) [Methylotenera versatilis 301]
ATGGTTATTGATGATAGTAATACGATACGTCGTAGCGCTGAAATATTCCTTAAAAATTCAGGTTGCTCAGTCATTTTGGC
GGAAGATGGATTTGATGCATTAGCCAAAATCTCAAACGAACATCCAGATATTATTTTTGTAGACATCATGATGCCTAGGC
TCGATGGCTATCAAACCTGCTCGCTCATTAAAAGAAACGCTCGCTACAAAAGTACACCTGTCATCATGCTTTCAAGTAAA
GATGGATTGTTCGATCGCGCGCGCGGCCGCATGGTAGGTTCCGACCAATATTTGACCAAACCTTTCACACAAGAAACACT
GATAGACGCAGTACAAACTTATGCGGCTATCAGTAGAGCTAACCCACAAGAGGCAGAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

64.655

92.063

0.595

Multiple sequence alignment