Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FFE90_RS02215 Genome accession   NZ_CP041757
Coordinates   431968..432918 (+) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus sp. KBS0812     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 426968..437918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FFE90_RS02190 (FFE90_002190) rapC 428427..429575 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  FFE90_RS02195 (FFE90_002195) phrC 429559..429681 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  FFE90_RS02200 (FFE90_002200) - 429781..429870 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  FFE90_RS02205 (FFE90_002205) - 429952..430065 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  FFE90_RS02210 (FFE90_002210) - 430219..431583 (-) 1365 WP_003234493.1 aspartate kinase -
  FFE90_RS02215 (FFE90_002215) ceuB 431968..432918 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  FFE90_RS02220 (FFE90_002220) yclO 432911..433858 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  FFE90_RS02225 (FFE90_002225) yclP 433852..434610 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  FFE90_RS02230 (FFE90_002230) yclQ 434632..435585 (+) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  FFE90_RS02235 (FFE90_002235) - 435632..437050 (-) 1419 WP_003246604.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=373783 FFE90_RS02215 WP_003234491.1 431968..432918(+) (ceuB) [Bacillus sp. KBS0812]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=373783 FFE90_RS02215 WP_003234491.1 431968..432918(+) (ceuB) [Bacillus sp. KBS0812]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment