Detailed information NTG0373783

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: G6Q95_RS18085
• Genome accession: NZ_CP049348
• Coordinates: 3814011..3814994 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 3R
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3809011..3819994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G6Q95_RS18060	-	3810160..3810267 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
G6Q95_RS18065	-	3810643..3810750 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
G6Q95_RS18070	-	3811126..3811233 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
G6Q95_RS18075	yhjV	3811709..3812980 (+)	1272	WP_064055624.1	aromatic amino acid transport family protein	-
G6Q95_RS18080	dppF	3813010..3814014 (-)	1005	WP_000107024.1	dipeptide ABC transporter ATP-binding subunit DppF	-
G6Q95_RS18085	amiE	3814011..3814994 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
G6Q95_RS18090	dppC	3815005..3815907 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
G6Q95_RS18095	dppB	3815917..3816936 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
G6Q95_RS18100	dppA	3817087..3818694 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=373783 G6Q95_RS18085 WP_001196486.1 3814011..3814994(-) (amiE) [Escherichia coli strain 3R]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=373783 G6Q95_RS18085 WP_001196486.1 3814011..3814994(-) (amiE) [Escherichia coli strain 3R]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404