Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FFH21_RS02260 Genome accession   NZ_CP041754
Coordinates   456798..457208 (+) Length   136 a.a.
NCBI ID   WP_004654414.1    Uniprot ID   Q48P87
Organism   Pseudomonas sp. KBS0707     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 451798..462208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FFH21_RS02230 (FFH21_002230) pyrR 452692..453204 (-) 513 WP_002551733.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  FFH21_RS02240 (FFH21_002240) ruvX 453447..453887 (-) 441 WP_004666453.1 Holliday junction resolvase RuvX -
  FFH21_RS02245 (FFH21_002245) - 453887..454459 (-) 573 WP_002551735.1 YqgE/AlgH family protein -
  FFH21_RS02250 (FFH21_002250) - 454535..455437 (-) 903 WP_041924402.1 energy transducer TonB -
  FFH21_RS02255 (FFH21_002255) gshB 455594..456553 (-) 960 WP_011167499.1 glutathione synthase -
  FFH21_RS02260 (FFH21_002260) pilG 456798..457208 (+) 411 WP_004654414.1 twitching motility response regulator PilG Regulator
  FFH21_RS02265 (FFH21_002265) pilH 457255..457620 (+) 366 WP_002551739.1 twitching motility response regulator PilH -
  FFH21_RS02270 (FFH21_002270) - 457635..458174 (+) 540 WP_011167500.1 chemotaxis protein CheW -
  FFH21_RS02275 (FFH21_002275) - 458223..460265 (+) 2043 WP_011167501.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14952.43 Da        Isoelectric Point: 8.5340

>NTDB_id=373750 FFH21_RS02260 WP_004654414.1 456798..457208(+) (pilG) [Pseudomonas sp. KBS0707]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEHHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=373750 FFH21_RS02260 WP_004654414.1 456798..457208(+) (pilG) [Pseudomonas sp. KBS0707]
ATGGAACAACACGCCTCCGCCTTGAAAGTCATGGTCATCGATGACTCGAAGACCATTCGCCGCACCGCCGAAACACTGCT
TAAAAACGCAGGTTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCACGAA
TCATATTCGTAGATATCATGATGCCGCGTCTGGACGGTTATCAGACGTGTGCGCTGATCAAGAACAACCGCGCATTCAAG
TCCACGCCGGTCATCATGCTGTCCTCCAAGGATGGTCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAGTT
TTTGACAAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACATC
ACATATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q48P87

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691

Multiple sequence alignment