Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FFH90_RS28780 Genome accession   NZ_CP041753
Coordinates   6237651..6238055 (-) Length   134 a.a.
NCBI ID   WP_007897954.1    Uniprot ID   -
Organism   Pseudomonas sp. ATCC 43928     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6232651..6243055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FFH90_RS28765 (FFH90_028765) - 6234565..6236622 (-) 2058 WP_018928717.1 methyl-accepting chemotaxis protein -
  FFH90_RS28770 (FFH90_028770) - 6236663..6237217 (-) 555 WP_018928716.1 chemotaxis protein CheW -
  FFH90_RS28775 (FFH90_028775) pilH 6237228..6237593 (-) 366 WP_007897961.1 twitching motility response regulator PilH -
  FFH90_RS28780 (FFH90_028780) pilG 6237651..6238055 (-) 405 WP_007897954.1 twitching motility response regulator PilG Regulator
  FFH90_RS28785 (FFH90_028785) gshB 6238278..6239231 (+) 954 WP_018928715.1 glutathione synthase -
  FFH90_RS28790 (FFH90_028790) - 6239309..6240208 (+) 900 WP_026286615.1 energy transducer TonB -
  FFH90_RS28795 (FFH90_028795) - 6240336..6240908 (+) 573 WP_018928713.1 YqgE/AlgH family protein -
  FFH90_RS28800 (FFH90_028800) ruvX 6240908..6241354 (+) 447 WP_019580620.1 Holliday junction resolvase RuvX -
  FFH90_RS28805 (FFH90_028805) pyrR 6241453..6241956 (+) 504 WP_086944407.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  FFH90_RS28810 (FFH90_028810) - 6241984..6242988 (+) 1005 WP_007939362.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14619.98 Da        Isoelectric Point: 7.2443

>NTDB_id=373743 FFH90_RS28780 WP_007897954.1 6237651..6238055(-) (pilG) [Pseudomonas sp. ATCC 43928]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAVVSPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=373743 FFH90_RS28780 WP_007897954.1 6237651..6238055(-) (pilG) [Pseudomonas sp. ATCC 43928]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGATGATTCGAAAACGATTCGTCGCACCGCCGAAACGCTGTT
GAAAAACGTGGGCTGTGAAGTCATCACCGCAATCGATGGTTTCGATGCCCTGGCCAAGATTGCCGACAATCACCCAGGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGCTATCAGACCTGCGCGTTGATCAAGAACAACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAGGGACGGGTTGTTCGACAAGGCCAAGGGGCGGATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATTCAGGCCCACGTACCGGGCTTTGCTGTCGTTTCGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701

Multiple sequence alignment