Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FNU76_RS09920 Genome accession   NZ_CP041730
Coordinates   2182826..2183209 (-) Length   127 a.a.
NCBI ID   WP_144278049.1    Uniprot ID   A0A516SES0
Organism   Chitinimonas arctica strain R3-44     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2177826..2188209
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNU76_RS09905 (FNU76_09905) - 2179602..2181836 (-) 2235 WP_223879288.1 methyl-accepting chemotaxis protein -
  FNU76_RS09910 (FNU76_09910) - 2181908..2182423 (-) 516 WP_144278047.1 chemotaxis protein CheW -
  FNU76_RS09915 (FNU76_09915) - 2182435..2182794 (-) 360 WP_179958460.1 response regulator -
  FNU76_RS09920 (FNU76_09920) pilG 2182826..2183209 (-) 384 WP_144278049.1 twitching motility response regulator PilG Regulator
  FNU76_RS09925 (FNU76_09925) yihA 2183459..2184091 (-) 633 WP_144278050.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
  FNU76_RS09930 (FNU76_09930) - 2184348..2184968 (+) 621 WP_144278051.1 cytochrome c -
  FNU76_RS09935 (FNU76_09935) - 2185061..2187097 (+) 2037 WP_223879289.1 cytochrome c biogenesis protein ResB -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 13964.16 Da        Isoelectric Point: 6.8611

>NTDB_id=373598 FNU76_RS09920 WP_144278049.1 2182826..2183209(-) (pilG) [Chitinimonas arctica strain R3-44]
MQNLAGIKVMVIDDSNTIRRSAEIFLGQAGCEVILAEDGFDALAKISDHHPDVIFVDVMMPRLDGYQTCSLIKKNPKFKA
TPVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLQAVGVHANHA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=373598 FNU76_RS09920 WP_144278049.1 2182826..2183209(-) (pilG) [Chitinimonas arctica strain R3-44]
ATGCAGAATCTTGCCGGCATCAAGGTCATGGTGATCGACGACAGCAATACCATCCGCCGTAGTGCCGAGATTTTTCTCGG
TCAGGCGGGCTGCGAGGTCATCCTGGCGGAAGACGGGTTCGACGCACTGGCCAAGATCAGCGACCATCATCCCGACGTGA
TTTTCGTCGATGTGATGATGCCTCGCCTGGATGGGTATCAGACTTGTTCCTTGATCAAGAAGAACCCGAAGTTCAAGGCC
ACGCCGGTCATCATGCTGTCCTCCAAGGACGGCTTGTTCGATCGTGCGCGCGGCCGCATGGTTGGGTCGGATGAATATCT
GACCAAGCCTTTTACGAAAGACAGCCTGCTGCAAGCAGTGGGCGTACACGCCAACCACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A516SES0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.935

97.638

0.654

Multiple sequence alignment