Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | G6536_RS10250 | Genome accession | NZ_CP049330 |
| Coordinates | 1995926..1996297 (+) | Length | 123 a.a. |
| NCBI ID | WP_016885441.1 | Uniprot ID | - |
| Organism | Bacillus licheniformis strain CP6 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1990926..2001297
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6536_RS10220 (G6536_10360) | - | 1991354..1991587 (+) | 234 | WP_003182231.1 | DUF896 domain-containing protein | - |
| G6536_RS10225 (G6536_10365) | recP/tkt | 1991754..1993757 (+) | 2004 | WP_009328229.1 | transketolase | Machinery gene |
| G6536_RS10230 (G6536_10370) | sirA | 1993912..1994349 (+) | 438 | WP_003182234.1 | sporulation inhibitor of replication protein SirA | - |
| G6536_RS10235 (G6536_10375) | - | 1994434..1994652 (+) | 219 | WP_003182236.1 | YneF family protein | - |
| G6536_RS10240 (G6536_10380) | - | 1994733..1994894 (-) | 162 | WP_229107189.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| G6536_RS10245 (G6536_10385) | - | 1995137..1995844 (+) | 708 | WP_003182240.1 | cytochrome c biogenesis protein CcdA | - |
| G6536_RS10250 (G6536_10390) | pilH | 1995926..1996297 (+) | 372 | WP_016885441.1 | response regulator | Machinery gene |
| G6536_RS10255 (G6536_10395) | - | 1996371..1996865 (+) | 495 | WP_085959522.1 | cytochrome c biogenesis protein CcdC | - |
| G6536_RS10260 (G6536_10400) | - | 1996901..1997329 (-) | 429 | WP_003182245.1 | DUF2621 domain-containing protein | - |
| G6536_RS10265 (G6536_10405) | - | 1997534..1997941 (-) | 408 | WP_003182248.1 | Hsp20/alpha crystallin family protein | - |
| G6536_RS10270 (G6536_10410) | - | 1998077..1998223 (-) | 147 | WP_003182250.1 | small acid-soluble spore protein P | - |
| G6536_RS10275 (G6536_10415) | sspO | 1998265..1998411 (-) | 147 | WP_003182252.1 | small acid-soluble spore protein O | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13951.47 Da Isoelectric Point: 4.6948
>NTDB_id=373572 G6536_RS10250 WP_016885441.1 1995926..1996297(+) (pilH) [Bacillus licheniformis strain CP6]
MTRVLIVDDAKFMRDKIREILETEDLQVAGEAENGEEAVLLYQELQPDLVIMDITMPVKNGIEALKDMIQLNPKVKVIMC
TAMRQKRIVVEVIEAGAKDFIVKPFEETKVVEAIRHVLGNACR
MTRVLIVDDAKFMRDKIREILETEDLQVAGEAENGEEAVLLYQELQPDLVIMDITMPVKNGIEALKDMIQLNPKVKVIMC
TAMRQKRIVVEVIEAGAKDFIVKPFEETKVVEAIRHVLGNACR
Nucleotide
Download Length: 372 bp
>NTDB_id=373572 G6536_RS10250 WP_016885441.1 1995926..1996297(+) (pilH) [Bacillus licheniformis strain CP6]
ATGACAAGGGTTTTAATTGTTGATGATGCAAAATTTATGAGAGATAAAATTAGAGAAATACTTGAAACAGAAGACTTGCA
AGTCGCGGGTGAAGCCGAGAACGGGGAAGAAGCTGTTTTGCTTTATCAAGAGCTGCAGCCGGACTTGGTTATCATGGATA
TTACGATGCCTGTGAAAAACGGGATAGAAGCTTTAAAGGATATGATCCAGCTGAACCCGAAAGTGAAAGTGATCATGTGT
ACGGCCATGCGGCAAAAGCGGATCGTCGTTGAGGTGATCGAAGCCGGAGCCAAGGACTTCATCGTCAAGCCTTTCGAGGA
AACGAAAGTCGTCGAAGCGATTCGGCATGTGCTCGGAAATGCTTGCAGATGA
ATGACAAGGGTTTTAATTGTTGATGATGCAAAATTTATGAGAGATAAAATTAGAGAAATACTTGAAACAGAAGACTTGCA
AGTCGCGGGTGAAGCCGAGAACGGGGAAGAAGCTGTTTTGCTTTATCAAGAGCTGCAGCCGGACTTGGTTATCATGGATA
TTACGATGCCTGTGAAAAACGGGATAGAAGCTTTAAAGGATATGATCCAGCTGAACCCGAAAGTGAAAGTGATCATGTGT
ACGGCCATGCGGCAAAAGCGGATCGTCGTTGAGGTGATCGAAGCCGGAGCCAAGGACTTCATCGTCAAGCCTTTCGAGGA
AACGAAAGTCGTCGAAGCGATTCGGCATGTGCTCGGAAATGCTTGCAGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.585 |
100 |
0.366 |