Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | G6536_RS09325 | Genome accession | NZ_CP049330 |
| Coordinates | 1820368..1820730 (+) | Length | 120 a.a. |
| NCBI ID | WP_003181796.1 | Uniprot ID | A0A6I1MJA4 |
| Organism | Bacillus licheniformis strain CP6 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1815368..1825730
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6536_RS09295 (G6536_09410) | flgD | 1816212..1816679 (+) | 468 | WP_003181782.1 | flagellar hook assembly protein FlgD | - |
| G6536_RS09300 (G6536_09415) | flgG | 1816707..1817498 (+) | 792 | WP_003181784.1 | flagellar basal body rod protein FlgG | - |
| G6536_RS09305 (G6536_09420) | - | 1817541..1817756 (+) | 216 | WP_003181786.1 | flagellar FlbD family protein | - |
| G6536_RS09310 (G6536_09425) | fliL | 1817753..1818184 (+) | 432 | WP_003181788.1 | flagellar basal body-associated protein FliL | - |
| G6536_RS09315 (G6536_09430) | fliM | 1818220..1819218 (+) | 999 | WP_003181789.1 | flagellar motor switch protein FliM | - |
| G6536_RS09320 (G6536_09435) | fliY | 1819208..1820341 (+) | 1134 | WP_003181794.1 | flagellar motor switch phosphatase FliY | - |
| G6536_RS09325 (G6536_09440) | pilH | 1820368..1820730 (+) | 363 | WP_003181796.1 | response regulator | Machinery gene |
| G6536_RS09330 (G6536_09445) | fliZ | 1820800..1821417 (+) | 618 | WP_228767680.1 | flagella biosynthesis regulatory protein FliZ | - |
| G6536_RS09335 (G6536_09450) | fliP | 1821410..1822075 (+) | 666 | WP_009328512.1 | flagellar type III secretion system pore protein FliP | - |
| G6536_RS09340 (G6536_09455) | fliQ | 1822091..1822360 (+) | 270 | WP_003181801.1 | flagellar biosynthesis protein FliQ | - |
| G6536_RS09345 (G6536_09460) | fliR | 1822368..1823144 (+) | 777 | WP_003181804.1 | flagellar biosynthetic protein FliR | - |
| G6536_RS09350 (G6536_09465) | flhB | 1823144..1824223 (+) | 1080 | WP_003181806.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13280.60 Da Isoelectric Point: 4.5762
>NTDB_id=373560 G6536_RS09325 WP_003181796.1 1820368..1820730(+) (pilH) [Bacillus licheniformis strain CP6]
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=373560 G6536_RS09325 WP_003181796.1 1820368..1820730(+) (pilH) [Bacillus licheniformis strain CP6]
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.136 |
98.333 |
0.375 |