Detailed information NTG0373557

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: G6536_RS09135
• Genome accession: NZ_CP049330
• Coordinates: 1787283..1788269 (+)
• Length: 328 a.a.
• NCBI ID: WP_003181713.1
• Uniprot ID: Q65JQ3
• Organism: Bacillus licheniformis strain CP6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1782283..1793269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G6536_RS09120 (G6536_09235)	acpP	1782482..1782715 (+)	234	WP_003181706.1	acyl carrier protein	-
G6536_RS09125 (G6536_09240)	rnc	1782857..1783606 (+)	750	WP_009328527.1	ribonuclease III	-
G6536_RS09130 (G6536_09245)	smc	1783706..1787266 (+)	3561	WP_003181710.1	chromosome segregation protein SMC	-
G6536_RS09135 (G6536_09250)	pilA	1787283..1788269 (+)	987	WP_003181713.1	signal recognition particle-docking protein FtsY	Machinery gene
G6536_RS09140 (G6536_09255)	-	1788403..1788726 (+)	324	WP_009328526.1	putative DNA-binding protein	-
G6536_RS09145 (G6536_09260)	ffh	1788742..1790082 (+)	1341	WP_003181717.1	signal recognition particle protein	-
G6536_RS09150 (G6536_09265)	rpsP	1790190..1790462 (+)	273	WP_003181719.1	30S ribosomal protein S16	-
G6536_RS09155 (G6536_09270)	-	1790462..1790707 (+)	246	WP_003181721.1	KH domain-containing protein	-
G6536_RS09160 (G6536_09275)	-	1790845..1791231 (+)	387	WP_003181722.1	YlqD family protein	-
G6536_RS09165 (G6536_09280)	rimM	1791236..1791760 (+)	525	WP_003181725.1	ribosome maturation factor RimM	-
G6536_RS09170 (G6536_09285)	trmD	1791757..1792488 (+)	732	WP_003181726.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
G6536_RS09175 (G6536_09290)	rplS	1792627..1792974 (+)	348	WP_003181728.1	50S ribosomal protein L19	-

Sequence

Protein

• Length: 328 a.a.
• Molecular weight: 36247.39 Da
• Isoelectric Point: 4.8125

>NTDB_id=373557 G6536_RS09135 WP_003181713.1 1787283..1788269(+) (pilA) [Bacillus licheniformis strain CP6]
MSFFKKLKEKITQQTDSVSGKFKEGLAKTRNTFQERVNELVSRYRKVDEDFFEELEEVLIGADVGVATVMELIDELKSEV
KRRNIQDPKEVQSVISEKLVEIYEGGEQEASELRVEDGRLNIILFVGVNGVGKTTTIGKLAHQFIKEGKNVVLAAGDTFR
AGAIDQLEVWGERVGAHVVKQAEGSDPAAVIYDAVQAAKARGADVLLCDTAGRLQNKVNLMKELEKVKRVIQREVPDAPH
EVLLVLDATTGQNAMTQAREFSKATDVSGIVLTKLDGTAKGGIVLAIRHELQIPVKFVGLGEKMDDLQPFEAESYVYGLF
SDLIEKEE

Nucleotide

• Length: 987 bp

>NTDB_id=373557 G6536_RS09135 WP_003181713.1 1787283..1788269(+) (pilA) [Bacillus licheniformis strain CP6]
ATGAGCTTTTTTAAAAAACTGAAAGAAAAAATCACACAGCAGACCGATTCGGTCTCAGGCAAATTTAAAGAAGGCCTGGC
GAAAACGAGAAATACGTTTCAGGAGCGGGTCAATGAGCTTGTCTCCCGCTACCGGAAAGTGGACGAGGATTTTTTTGAAG
AGCTTGAAGAGGTTCTGATCGGCGCTGATGTCGGCGTTGCGACTGTTATGGAGCTGATTGACGAGCTGAAGAGCGAGGTC
AAGCGAAGAAATATTCAGGACCCGAAAGAGGTGCAGTCCGTCATTTCTGAAAAGCTCGTTGAAATCTATGAAGGCGGGGA
GCAGGAAGCATCAGAGCTCCGCGTCGAAGACGGCCGCCTAAACATCATTTTATTCGTCGGCGTCAACGGCGTCGGCAAAA
CGACGACGATCGGCAAGCTTGCCCATCAATTCATTAAAGAAGGCAAAAATGTCGTTCTTGCTGCCGGAGATACATTCAGG
GCCGGCGCGATCGACCAGCTTGAAGTGTGGGGAGAGCGCGTCGGCGCGCATGTCGTCAAACAGGCGGAAGGCTCGGATCC
TGCGGCTGTTATCTATGACGCCGTTCAAGCCGCGAAAGCGCGCGGCGCCGATGTCCTGCTTTGCGACACGGCAGGACGCC
TGCAAAATAAAGTGAACTTAATGAAAGAGCTAGAAAAGGTAAAGCGCGTGATTCAGCGCGAAGTGCCTGATGCGCCTCAT
GAAGTGCTGCTCGTACTGGATGCGACGACAGGGCAGAACGCAATGACACAGGCGCGCGAATTTTCCAAAGCGACTGATGT
CTCAGGCATCGTGCTGACGAAGCTCGACGGAACGGCAAAAGGCGGCATCGTCCTCGCCATCCGCCATGAGCTGCAGATTC
CGGTCAAGTTTGTCGGGCTGGGGGAAAAAATGGATGACCTGCAGCCGTTTGAAGCAGAGTCATATGTATACGGCCTGTTT
TCCGATCTGATCGAGAAAGAAGAGTAG

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: Q65JQ3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	44.04	92.073	0.405