Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   FO456_RS02460 Genome accession   NZ_CP041724
Coordinates   528447..529355 (+) Length   302 a.a.
NCBI ID   WP_037545648.1    Uniprot ID   -
Organism   Staphylococcus lugdunensis strain SL55     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 523447..534355
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FO456_RS02440 (FO456_02445) wecB 524464..525603 (+) 1140 WP_002478510.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) -
  FO456_RS02445 (FO456_02450) - 525789..527237 (-) 1449 WP_070647758.1 alkaline phosphatase -
  FO456_RS12990 - 527456..527551 (+) 96 Protein_463 hypothetical protein -
  FO456_RS02455 (FO456_02460) braR 527776..528441 (+) 666 WP_070647759.1 response regulator transcription factor Regulator
  FO456_RS02460 (FO456_02465) braS 528447..529355 (+) 909 WP_037545648.1 sensor histidine kinase Regulator
  FO456_RS02465 (FO456_02470) - 529461..530210 (+) 750 WP_002478514.1 ABC transporter ATP-binding protein -
  FO456_RS02470 (FO456_02475) - 530233..532194 (+) 1962 WP_225306480.1 ABC transporter permease -
  FO456_RS02475 (FO456_02480) - 532237..532686 (+) 450 WP_002492528.1 hypothetical protein -
  FO456_RS02480 (FO456_02485) - 532773..533252 (+) 480 WP_070647761.1 DUF4064 domain-containing protein -
  FO456_RS02485 (FO456_02490) - 533525..534199 (+) 675 WP_002478518.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 302 a.a.        Molecular weight: 35305.88 Da        Isoelectric Point: 7.1984

>NTDB_id=373444 FO456_RS02460 WP_037545648.1 528447..529355(+) (braS) [Staphylococcus lugdunensis strain SL55]
MTTFFDTIKRELIITAMALVVFLVIFFVFNLPYYAYFLGSGIMLFIMVIYWFIALSEFKKQQRLTSQLKVLEQEVQQLRS
KQTQYQNDIESYFLTWVHQIKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNHETDMSFTKVTVNELV
KPLIMKYSIQFIDQHTRIHYDRSDEEVLTDVQWASIMIEQILNNALKYARGKDIWLTFDKDINVLSIKDNGVGISTADLP
KIFDKGYSGYNGRLNEQSTGIGLFIVKHISNHIHHQVEVDSKLGQGTTFKIYFPKVDKMNEL

Nucleotide


Download         Length: 909 bp        

>NTDB_id=373444 FO456_RS02460 WP_037545648.1 528447..529355(+) (braS) [Staphylococcus lugdunensis strain SL55]
ATGACAACGTTCTTTGACACAATTAAGCGTGAACTGATCATCACCGCAATGGCATTAGTTGTTTTTTTAGTAATCTTTTT
TGTCTTTAATTTGCCCTACTATGCCTACTTTTTAGGAAGTGGCATTATGTTATTTATCATGGTTATTTATTGGTTTATCG
CATTGAGCGAGTTTAAAAAACAACAACGATTGACATCTCAACTTAAAGTGTTAGAACAAGAAGTTCAACAATTAAGAAGC
AAGCAAACGCAATACCAAAATGACATCGAAAGCTATTTTCTTACTTGGGTACATCAAATTAAAACACCGATCACTGCCTC
CAAACTATTACTCGAACGTAATGAAGACAATGTTGTTAACCGTGTCCGACAAGAAATAATTCAAATTGATAATTACACTA
GTTTAGCTTTAAGCTATTTAAAATTAATGAATCATGAAACTGACATGAGCTTTACTAAAGTAACTGTCAATGAATTGGTT
AAGCCATTAATAATGAAATATTCAATACAATTTATCGATCAACATACACGTATACATTATGATCGCTCAGATGAAGAAGT
ATTGACAGATGTGCAATGGGCTTCCATTATGATAGAGCAAATTTTGAATAATGCACTAAAATATGCTCGTGGTAAAGATA
TTTGGTTAACTTTTGATAAAGATATAAACGTACTGTCTATCAAAGATAATGGTGTGGGTATTAGTACTGCTGATTTACCG
AAAATTTTTGATAAAGGTTATTCTGGTTATAATGGTCGTTTAAATGAGCAATCAACTGGTATTGGATTGTTTATAGTAAA
ACATATATCGAATCATATTCATCATCAAGTAGAAGTAGATTCTAAGCTAGGTCAAGGTACGACATTTAAGATTTATTTTC
CTAAGGTAGATAAAATGAATGAACTATAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(196-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

58.904

96.689

0.57

Multiple sequence alignment