Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SARLGA251_RS03230 Genome accession   NC_017349
Coordinates   688050..688724 (+) Length   224 a.a.
NCBI ID   WP_001166496.1    Uniprot ID   Q2YSS2
Organism   Staphylococcus aureus subsp. aureus LGA251     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 683050..693724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SARLGA251_RS03200 (SARLGA251_05870) - 683266..684333 (+) 1068 WP_000980139.1 membrane protein -
  SARLGA251_RS03205 (SARLGA251_05880) - 684484..685527 (+) 1044 WP_001030757.1 alpha/beta hydrolase -
  SARLGA251_RS03215 (SARLGA251_05890) - 685857..686285 (+) 429 WP_000198501.1 hypothetical protein -
  SARLGA251_RS03220 (SARLGA251_05900) - 686492..686998 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  SARLGA251_RS03225 (SARLGA251_05910) graX 687111..688034 (+) 924 WP_000802958.1 auxiliary protein GraX/ApsX -
  SARLGA251_RS03230 (SARLGA251_05920) braR 688050..688724 (+) 675 WP_001166496.1 response regulator transcription factor GraR/ApsR Regulator
  SARLGA251_RS03235 (SARLGA251_05930) graS 688717..689757 (+) 1041 WP_001061261.1 histidine kinase GraS/ApsS -
  SARLGA251_RS03240 (SARLGA251_05940) vraF 689901..690662 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  SARLGA251_RS03245 (SARLGA251_05950) vraG 690652..692541 (+) 1890 WP_000143606.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26093.93 Da        Isoelectric Point: 4.3563

>NTDB_id=37331 SARLGA251_RS03230 WP_001166496.1 688050..688724(+) (braR) [Staphylococcus aureus subsp. aureus LGA251]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=37331 SARLGA251_RS03230 WP_001166496.1 688050..688724(+) (braR) [Staphylococcus aureus subsp. aureus LGA251]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATTTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTGCGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2YSS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397

Multiple sequence alignment