Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FOH38_RS11510 Genome accession   NZ_CP041696
Coordinates   2321006..2321956 (+) Length   316 a.a.
NCBI ID   WP_143996999.1    Uniprot ID   -
Organism   Lysinibacillus fusiformis strain 1226     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2316006..2326956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOH38_RS11490 (FOH38_11490) - 2316499..2317644 (+) 1146 WP_143996995.1 M20 peptidase aminoacylase family protein -
  FOH38_RS11495 (FOH38_11495) - 2317644..2318468 (+) 825 WP_143996996.1 GNAT family N-acetyltransferase -
  FOH38_RS11500 (FOH38_11500) menC 2318491..2319597 (+) 1107 WP_143996997.1 o-succinylbenzoate synthase -
  FOH38_RS11505 (FOH38_11505) - 2319663..2320718 (+) 1056 WP_143996998.1 hypothetical protein -
  FOH38_RS11510 (FOH38_11510) ceuB 2321006..2321956 (+) 951 WP_143996999.1 ABC transporter permease Machinery gene
  FOH38_RS11515 (FOH38_11515) - 2321949..2322902 (+) 954 WP_143997000.1 iron chelate uptake ABC transporter family permease subunit -
  FOH38_RS11520 (FOH38_11520) - 2322899..2323660 (+) 762 WP_143997001.1 ABC transporter ATP-binding protein -
  FOH38_RS11525 (FOH38_11525) - 2323720..2324727 (+) 1008 WP_143997002.1 siderophore ABC transporter substrate-binding protein -
  FOH38_RS11530 (FOH38_11530) - 2324729..2325043 (+) 315 WP_143997003.1 antibiotic biosynthesis monooxygenase -
  FOH38_RS11535 (FOH38_11535) - 2325347..2325724 (-) 378 WP_143997004.1 inorganic diphosphatase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34795.96 Da        Isoelectric Point: 9.9642

>NTDB_id=373265 FOH38_RS11510 WP_143996999.1 2321006..2321956(+) (ceuB) [Lysinibacillus fusiformis strain 1226]
MKIRYLLTATVVLSIVSLFIGVVDIKPSDLLDFESEETRLFLISRIPRLAAILLAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATKLGVLISMMFFSNVTYFQKISFAFIFALAGTLLFMQILNRIKFKDAIFIPLIGLMFGNILSSITTFFAYKADII
QNISAWLQGDFSLMMKGRYELLYISVPVLILAYIYANRFTVAGMGEDFAKNLGLSYKFVLNFGLVLVALISTTVVLTVGV
IPFLGLIVPNIVSLFKGDNLAKTLPHTALLGMSFLLFCDILGRILIFPYEIPISMTVGVIGSAIFLFMLFRGKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=373265 FOH38_RS11510 WP_143996999.1 2321006..2321956(+) (ceuB) [Lysinibacillus fusiformis strain 1226]
ATGAAAATAAGATATCTTTTAACAGCAACTGTTGTGTTGTCTATCGTGTCGTTGTTTATCGGTGTAGTGGATATTAAGCC
GAGTGACCTATTAGACTTCGAATCAGAGGAAACTAGACTTTTTTTAATTAGTCGTATACCGAGACTTGCGGCAATATTGC
TTGCAGGGGCAGGTATGAGTATTGCTGGTTTAATTATGCAAAGCTTAAGTAGGAATAAGTTCGTGTCGCCGACGACAGCA
GGAACTTTAGACGCAACGAAATTAGGTGTACTAATTTCAATGATGTTTTTCTCAAATGTCACGTACTTTCAAAAAATTTC
CTTCGCTTTCATATTTGCTTTAGCCGGCACGTTATTATTTATGCAAATATTAAATCGAATCAAATTTAAAGATGCGATAT
TTATACCGCTTATTGGCCTAATGTTCGGAAATATTCTTTCGTCGATCACGACATTCTTTGCGTACAAGGCGGATATTATC
CAAAACATTTCTGCATGGTTACAAGGGGATTTTTCATTAATGATGAAAGGTCGTTATGAGCTTTTATACATAAGTGTACC
TGTACTGATTTTAGCTTACATTTATGCAAACCGCTTCACTGTTGCTGGCATGGGTGAGGATTTTGCCAAAAATCTTGGTC
TTTCTTATAAGTTTGTTTTAAATTTTGGTTTAGTGTTAGTAGCACTTATCTCAACAACTGTGGTGTTGACGGTTGGGGTT
ATTCCATTCCTTGGTTTAATCGTTCCAAATATTGTTTCGCTGTTCAAAGGAGATAATTTAGCGAAGACATTACCCCATAC
AGCATTGTTAGGTATGTCATTCCTATTATTCTGCGATATTTTAGGCAGGATATTAATTTTTCCTTATGAAATTCCGATTA
GCATGACAGTCGGTGTTATCGGAAGTGCAATCTTCCTATTTATGTTGTTTAGGGGGAAAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

100

0.538

Multiple sequence alignment