Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SARLGA251_RS00120 Genome accession   NC_017349
Coordinates   30227..31027 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus subsp. aureus LGA251     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 25227..36027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SARLGA251_RS00105 (SARLGA251_00190) walK 25897..27723 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  SARLGA251_RS00110 (SARLGA251_00200) yycH 27716..29050 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  SARLGA251_RS00115 (SARLGA251_00210) - 29051..29839 (+) 789 WP_001104163.1 two-component system regulatory protein YycI -
  SARLGA251_RS00120 (SARLGA251_00220) vicX 30227..31027 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  SARLGA251_RS00125 (SARLGA251_00230) adsA 31254..33572 (+) 2319 WP_000645743.1 LPXTG-anchored adenosine synthase AdsA -
  SARLGA251_RS00130 (SARLGA251_00240) rlmH 33941..34420 (+) 480 WP_000704778.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SARLGA251_RS00135 (SARLGA251_00250) blaZ 34736..35587 (-) 852 WP_000733402.1 mecC-type penicillin-hydrolyzing class A beta-lactamase BlaZ -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=37322 SARLGA251_RS00120 WP_000088649.1 30227..31027(+) (vicX) [Staphylococcus aureus subsp. aureus LGA251]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=37322 SARLGA251_RS00120 WP_000088649.1 30227..31027(+) (vicX) [Staphylococcus aureus subsp. aureus LGA251]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TTTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACTGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTAGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGCAACACGA
AACGTATTTACCTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474

Multiple sequence alignment