Detailed information NTG0373199

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: FOG69_RS12490
• Genome accession: NZ_CP041693
• Coordinates: 2414846..2417197 (-)
• Length: 783 a.a.
• NCBI ID: WP_014470699.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain H
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2409846..2422197

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOG69_RS12455 (FOG69_12455)	-	2410209..2410547 (-)	339	WP_014470695.1	YqxA family protein	-
FOG69_RS12460 (FOG69_12460)	spoIIP	2410564..2411757 (-)	1194	WP_014470696.1	stage II sporulation protein P	-
FOG69_RS12465 (FOG69_12465)	gpr	2411825..2412931 (-)	1107	WP_014470697.1	GPR endopeptidase	-
FOG69_RS12470 (FOG69_12470)	rpsT	2413134..2413400 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
FOG69_RS12475 (FOG69_12475)	holA	2413423..2414458 (-)	1036	Protein_2445	DNA polymerase III subunit delta	-
FOG69_RS12480 (FOG69_12480)	-	2414498..2414652 (-)	155	Protein_2446	hypothetical protein	-
FOG69_RS12485 (FOG69_12485)	-	2414693..2414827 (+)	135	WP_003152870.1	YqzM family protein	-
FOG69_RS12490 (FOG69_12490)	comEC	2414846..2417197 (-)	2352	WP_014470699.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
FOG69_RS12495 (FOG69_12495)	-	2417198..2417767 (-)	570	WP_014470700.1	ComE operon protein 2	-
FOG69_RS12500 (FOG69_12500)	comEA	2417833..2418447 (-)	615	WP_014470701.1	helix-hairpin-helix domain-containing protein	Machinery gene
FOG69_RS12505 (FOG69_12505)	comER	2418507..2419328 (+)	822	WP_014470702.1	late competence protein ComER	-
FOG69_RS12510 (FOG69_12510)	-	2419397..2420134 (-)	738	WP_014470703.1	class I SAM-dependent methyltransferase	-
FOG69_RS12515 (FOG69_12515)	rsfS	2420131..2420487 (-)	357	WP_014470704.1	ribosome silencing factor	-
FOG69_RS12520 (FOG69_12520)	yqeK	2420504..2421064 (-)	561	WP_014470705.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
FOG69_RS12525 (FOG69_12525)	-	2421054..2421623 (-)	570	WP_014470706.1	nicotinate-nucleotide adenylyltransferase	-
FOG69_RS12530 (FOG69_12530)	yhbY	2421634..2421924 (-)	291	WP_014470707.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 87106.95 Da
• Isoelectric Point: 9.3142

>NTDB_id=373199 FOG69_RS12490 WP_014470699.1 2414846..2417197(-) (comEC) [Bacillus amyloliquefaciens strain H]
MKYKYLLLPLAAVSATAGTAAANSFWVLFFFLLYLLFIIVKTKQHTPVIVCLVSFCLYFFLYTVCDAANVSRYQAGSYTE
QALIINIPKVDGAKMSAVIRTHDKEKWAASYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPRHATVPGGFDYKEFLYSQHI
HWIFSVTSIKQCEKSEQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGMLLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLLKRSIHSSAALSMSYLLLLLFDP
YLLWQAGFQLSFAVSAALILSSSILKKAGKNRLAGLAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPF
SVIGFLLLLLSRQAGEFLFYLFDLVMKPVHDFITYAASVDLFTMIASKPDFLSLLMLAVSVFTLFAALEKGGFLKLRKSA
LFFFAVLAYIMFRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYSEESWKEKHHPYSIGEKVLVPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKKHRVKRLIVPVGFVKEPKDGEILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESPGGRSKNDSSLVLWTVLGRVSWLLTGDLESDGETEVLKTYPNLKADILKAGHHGSKSSTSDAFLKQLQPETALISAGK
DNRYHHPHEEVLDRLKAYSVNVLRTDVSGTIRYRFKKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=373199 FOG69_RS12490 WP_014470699.1 2414846..2417197(-) (comEC) [Bacillus amyloliquefaciens strain H]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACCGCGGGAACTGCCGCCGCTAATTCCTTCTGGGT
CCTATTCTTTTTCCTTCTGTATCTTCTCTTTATTATCGTAAAAACAAAGCAGCACACACCGGTTATCGTCTGCCTCGTTT
CTTTTTGTCTTTATTTCTTTCTGTATACGGTTTGTGACGCTGCGAATGTATCCCGGTATCAGGCCGGCAGCTATACTGAA
CAGGCTCTCATCATAAACATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACCCATGACAAAGAAAAATG
GGCCGCTTCGTACAAAATCCGGTCCCTTGAAGAAAAAAGACTCATTGAACAGCTGGAACCGGGGATGCGCTGTACGTTTA
CAGGCTCACTGGAACAGCCCCGACATGCGACGGTTCCCGGGGGTTTTGATTATAAGGAATTTCTTTATTCCCAGCATATT
CACTGGATATTTTCCGTTACTTCCATTAAGCAGTGCGAAAAATCCGAACAGCCGCTGTTTAAGCTTCTGAACATCAGAAA
GAATTTGATTTCGATCATTCGGAATCATGTACCTGAATCTTCCGCCGGAATTGTTGAGGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGATATACTGAGCGCTTATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCGGGGTTATTTTATGCCCTTATCAGAATTGGACTGACAAGAGAAAAGGCGGGGATGTTGTTGCTGCT
TTTTTTGCCGGTGTATACGTTGTTAAGCGGGGCTGCCCCATCTGTGCTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTTTGAAACGCAGCATTCATTCCTCAGCTGCATTGTCCATGTCTTATCTGCTGCTTCTGCTGTTTGATCCT
TACCTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCGCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCAGGGAAAAACAGACTCGCCGGGCTTGCGATGGCTTCATTTATTGCGGAGCTCAGTTCGCTGCCGTTTCTTCTCTATC
ATTTTCAGCAGATTTCGCTCGTCAGTTTTCCGATGAATATGGTGATGGTGCCATTTTATACGTTATTTGTCATTCCGTTT
TCTGTCATCGGTTTTCTTCTTCTCTTACTTTCCAGGCAGGCGGGGGAATTTTTGTTTTACCTGTTTGATCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTACAATGATTGCGTCAAAGCCTGACTTTCTGTCGC
TTCTTATGCTTGCGGTTTCCGTTTTTACGCTTTTTGCAGCTTTGGAAAAGGGAGGTTTTTTAAAGCTCAGGAAATCGGCT
CTTTTTTTCTTTGCGGTTTTGGCATATATAATGTTCCGTCCTTATTTCAGTCCTTGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCACTGTTTATAAGTGCCCCGCACCGTAAAGGTACCGTAATGGTTGATACAGGAGGAGTGATTGCTT
ATTCCGAAGAATCGTGGAAAGAAAAACACCACCCGTATTCTATCGGTGAGAAAGTTTTAGTTCCGTTTTTGAACGGAAAA
GGGGTGAAAAAGCTGGATGCGCTGATTTTAACCCATGCGGATCAGGATCATATCGGGGAAGCCGGAGTATTAATCAAAAA
ACATAGAGTGAAGCGGTTAATTGTCCCCGTGGGATTCGTGAAGGAACCGAAGGATGGGGAAATATTGAATATGGCGAAAG
AAAACAACATTCCCGTTGCTGAAGCAAAACGGGGCGATACCATAACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGCCTGGCGGAAGGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAGGCAGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACAGAGGTGCTGAAAACGTATCCGAATCTGAAGGCTGATATATTGAAGGCCGGTC
ATCACGGCAGCAAAAGCTCTACGAGTGACGCCTTTTTGAAACAGCTTCAGCCGGAGACAGCACTGATTTCAGCAGGAAAA
GATAATCGTTATCATCATCCGCATGAAGAAGTGCTGGATCGTTTGAAAGCTTACTCTGTCAATGTGCTTCGCACCGATGT
CAGCGGAACTATTCGATACAGATTTAAAAAAGGCGCCGGAACGTTTTCTGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAGGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (27-171)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	55.699	98.595	0.549