Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | FOG69_RS12070 | Genome accession | NZ_CP041693 |
| Coordinates | 2340280..2341317 (-) | Length | 345 a.a. |
| NCBI ID | WP_013352871.1 | Uniprot ID | A0A9P1JIA4 |
| Organism | Bacillus amyloliquefaciens strain H | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2335280..2346317
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOG69_RS12020 (FOG69_12020) | tasA | 2335516..2336301 (-) | 786 | WP_013352862.1 | biofilm matrix protein TasA | - |
| FOG69_RS12025 (FOG69_12025) | sipW | 2336366..2336950 (-) | 585 | WP_013352863.1 | signal peptidase I SipW | - |
| FOG69_RS12030 (FOG69_12030) | tapA | 2336922..2337593 (-) | 672 | WP_013352864.1 | amyloid fiber anchoring/assembly protein TapA | - |
| FOG69_RS12035 (FOG69_12035) | - | 2337851..2338180 (+) | 330 | WP_013352865.1 | DUF3889 domain-containing protein | - |
| FOG69_RS12040 (FOG69_12040) | - | 2338221..2338400 (-) | 180 | WP_013352866.1 | YqzE family protein | - |
| FOG69_RS12045 (FOG69_12045) | comGG | 2338454..2338831 (-) | 378 | WP_013352867.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| FOG69_RS12050 (FOG69_12050) | comGF | 2338833..2339333 (-) | 501 | WP_013352868.1 | competence type IV pilus minor pilin ComGF | - |
| FOG69_RS12055 (FOG69_12055) | comGE | 2339242..2339556 (-) | 315 | WP_014470662.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| FOG69_RS12060 (FOG69_12060) | comGD | 2339540..2339977 (-) | 438 | WP_013352869.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| FOG69_RS12065 (FOG69_12065) | comGC | 2339967..2340275 (-) | 309 | WP_013352870.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FOG69_RS12070 (FOG69_12070) | comGB | 2340280..2341317 (-) | 1038 | WP_013352871.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| FOG69_RS12075 (FOG69_12075) | comGA | 2341304..2342374 (-) | 1071 | WP_013352872.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FOG69_RS12080 (FOG69_12080) | - | 2342568..2343518 (-) | 951 | WP_013352873.1 | magnesium transporter CorA family protein | - |
| FOG69_RS12085 (FOG69_12085) | - | 2343665..2344966 (+) | 1302 | WP_013352874.1 | hemolysin family protein | - |
| FOG69_RS12090 (FOG69_12090) | - | 2345004..2345834 (-) | 831 | WP_014470663.1 | STAS domain-containing protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39644.94 Da Isoelectric Point: 9.4989
>NTDB_id=373196 FOG69_RS12070 WP_013352871.1 2340280..2341317(-) (comGB) [Bacillus amyloliquefaciens strain H]
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLKLQLHKRQLAELTDGIRRLREGDSFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGELLQRKLMQTNQIKKMLRYPMFLICSVCVMFYILQSLIIPQFSGIYQSMNMNTSGATAFIFAFF
QHFHEACALGMSAVLSLFLYVWFLCKKKSPQDKMLIVVKIPLIGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGRLHRELYTYSQFMMERLEQNAEKYTGILQPVIY
GVVAGMILLVYMSMLMPMYQMMNQM
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLKLQLHKRQLAELTDGIRRLREGDSFYQVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGELLQRKLMQTNQIKKMLRYPMFLICSVCVMFYILQSLIIPQFSGIYQSMNMNTSGATAFIFAFF
QHFHEACALGMSAVLSLFLYVWFLCKKKSPQDKMLIVVKIPLIGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEAEMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGRLHRELYTYSQFMMERLEQNAEKYTGILQPVIY
GVVAGMILLVYMSMLMPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=373196 FOG69_RS12070 WP_013352871.1 2340280..2341317(-) (comGB) [Bacillus amyloliquefaciens strain H]
ATGAAGCGGATTAAAAGAACCTGGCCGTTGAAGGACCAAGCGGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGG
ATACAGCCTGATTGAAGGGCTCAGACTGCTGAAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGACGGACGGAATTC
GCCGGCTGAGAGAAGGCGATTCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCATAAAGAAGCCGTCTCGATCTGCTAT
TTCGCGGAGAAACACGGAGAATTGCCGGGGGCGATGAAACAAAGCGGCGAATTGTTACAGAGAAAGCTCATGCAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATATGTTCCGTCTGCGTCATGTTTTATATCCTGCAAAGTTTGA
TTATTCCGCAGTTTTCAGGGATTTATCAATCAATGAATATGAATACTTCCGGTGCGACTGCTTTCATCTTTGCGTTTTTT
CAGCATTTTCATGAAGCCTGCGCACTGGGGATGTCAGCCGTTCTCAGCTTGTTTTTGTACGTTTGGTTCTTATGTAAGAA
AAAATCCCCGCAAGACAAGATGCTTATCGTTGTGAAAATCCCCCTGATAGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGTCTTTCTATCTATGACAGCTTAACTGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTACCGTGAAGAAGCAGAGATGCTCATTACACGTTTGAAGGCCGGTGAAACTATAGAATCTGCTCTTTC
CGGCCATCCGTGTTATGAAAAAGATCTTGCGGCTGCAGTCAGTCACGGACAGGCAAACGGCCGGCTTCATCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAATGCGGAGAAGTATACCGGTATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTACTTGTGTATATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
ATGAAGCGGATTAAAAGAACCTGGCCGTTGAAGGACCAAGCGGCTTTTTTGAAAAGGCTCGGTGAAATGACGGAAAAAGG
ATACAGCCTGATTGAAGGGCTCAGACTGCTGAAACTCCAGCTGCATAAACGTCAGCTTGCAGAGCTGACGGACGGAATTC
GCCGGCTGAGAGAAGGCGATTCGTTTTACCAAGTGCTTGAGGCACTGTCTTTTCATAAAGAAGCCGTCTCGATCTGCTAT
TTCGCGGAGAAACACGGAGAATTGCCGGGGGCGATGAAACAAAGCGGCGAATTGTTACAGAGAAAGCTCATGCAGACGAA
TCAAATCAAAAAAATGCTCCGGTATCCGATGTTTTTAATATGTTCCGTCTGCGTCATGTTTTATATCCTGCAAAGTTTGA
TTATTCCGCAGTTTTCAGGGATTTATCAATCAATGAATATGAATACTTCCGGTGCGACTGCTTTCATCTTTGCGTTTTTT
CAGCATTTTCATGAAGCCTGCGCACTGGGGATGTCAGCCGTTCTCAGCTTGTTTTTGTACGTTTGGTTCTTATGTAAGAA
AAAATCCCCGCAAGACAAGATGCTTATCGTTGTGAAAATCCCCCTGATAGGAAAAGCGGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGTCTTTCTATCTATGACAGCTTAACTGCTTTTAAAGAACAATCT
TTTCTGCCTTTTTACCGTGAAGAAGCAGAGATGCTCATTACACGTTTGAAGGCCGGTGAAACTATAGAATCTGCTCTTTC
CGGCCATCCGTGTTATGAAAAAGATCTTGCGGCTGCAGTCAGTCACGGACAGGCAAACGGCCGGCTTCATCGCGAACTTT
ATACGTACAGCCAGTTTATGATGGAGCGTCTTGAACAAAATGCGGAGAAGTATACCGGTATTCTCCAGCCTGTCATTTAC
GGTGTTGTGGCCGGTATGATTTTACTTGTGTATATGTCAATGCTGATGCCGATGTACCAGATGATGAACCAAATGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
66.873 |
93.623 |
0.626 |