Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   FGF55_RS15405 Genome accession   NZ_CP041691
Coordinates   3097806..3100157 (-) Length   783 a.a.
NCBI ID   WP_269800792.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ZJU1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3092806..3105157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGF55_RS15365 (FGF55_15365) - 3093266..3093697 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  FGF55_RS15370 (FGF55_15370) - 3093697..3094038 (+) 342 WP_014418758.1 Na(+)/H(+) antiporter subunit C -
  FGF55_RS15375 (FGF55_15375) - 3094031..3095512 (+) 1482 WP_032863920.1 Na+/H+ antiporter subunit D -
  FGF55_RS15380 (FGF55_15380) - 3095518..3095994 (+) 477 WP_014418760.1 Na+/H+ antiporter subunit E -
  FGF55_RS15385 (FGF55_15385) - 3095994..3096278 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  FGF55_RS15390 (FGF55_15390) mnhG 3096262..3096636 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  FGF55_RS15395 (FGF55_15395) - 3096676..3097059 (-) 384 WP_014418761.1 hotdog fold thioesterase -
  FGF55_RS15400 (FGF55_15400) comA 3097081..3097725 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  FGF55_RS15405 (FGF55_15405) comP 3097806..3100157 (-) 2352 WP_269800792.1 histidine kinase Regulator
  FGF55_RS15410 (FGF55_15410) comX 3100135..3100305 (-) 171 WP_032863917.1 competence pheromone ComX -
  FGF55_RS15415 (FGF55_15415) - 3100305..3101231 (-) 927 WP_014721741.1 polyprenyl synthetase family protein -
  FGF55_RS15420 (FGF55_15420) degQ 3101362..3101502 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  FGF55_RS15430 (FGF55_15430) - 3101968..3102309 (+) 342 WP_014418765.1 hypothetical protein -
  FGF55_RS15435 (FGF55_15435) - 3102316..3103539 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  FGF55_RS15440 (FGF55_15440) - 3103669..3105135 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 783 a.a.        Molecular weight: 90764.00 Da        Isoelectric Point: 9.0674

>NTDB_id=373133 FGF55_RS15405 WP_269800792.1 3097806..3100157(-) (comP) [Bacillus amyloliquefaciens strain ZJU1]
MTQLGLLKKQESCGSLRQLLKCFTVALLLFGIFYFTFIIYYTQNGILIGTKVVQSSNQELKVVDISKSSYGRIMGLKIGD
RITEINGGKPKKENIYGSYLAKIKYLKVERDGRLIELKNIEFIYLDSPYSFFSYIIPCIFFLLSLICIFYIFKVNLRKDS
VSAYILICFLLCISIAYLSAGGVTRGYRINRYINLYTFLAVPVLYLNFLHQYFKELKVKFSRGIYVGLLYLLPLINILLE
LFRDRIGHHLIVSLNLLTFLLEMIVVYVSLILYQIKHRKKDFSYLLKVLLVSNTIAFLPFSLLYIAPLIIFGQYVYSAVV
TAPFLLLIPLALVYQFVVNKIYNIDFLLGRLRYYCLLAVIPTIGIVWVFVVFINKNKNFDTFQITLFVFLIMLAVFYFKE
VLDFKFRLKRFSEKYNYQDSIFKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPY
KKEFDKVTSEIGKIIEVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQD
LKQQGSNPVWLKKLMFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMT
RETCHELRPQLLYDLGLVKAVSKLTAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLI
SIQNKVILHYEDDGVGCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2352 bp        

>NTDB_id=373133 FGF55_RS15405 WP_269800792.1 3097806..3100157(-) (comP) [Bacillus amyloliquefaciens strain ZJU1]
ATGACCCAGCTTGGTTTACTTAAAAAACAAGAGAGTTGTGGTTCCTTGAGACAATTGCTGAAATGTTTTACGGTTGCTTT
ATTATTGTTCGGAATTTTTTATTTTACTTTTATAATTTATTATACTCAGAATGGAATATTAATAGGAACAAAAGTAGTTC
AGTCTTCTAACCAAGAATTAAAAGTTGTGGATATTTCAAAATCTTCTTATGGAAGAATAATGGGTCTAAAAATTGGGGAC
AGAATTACTGAAATAAATGGCGGAAAACCTAAAAAAGAAAATATTTATGGTTCATACCTTGCGAAAATTAAGTATTTAAA
AGTTGAGAGAGACGGGCGTTTAATAGAACTTAAAAATATTGAATTCATTTATTTAGATAGTCCATATAGTTTCTTTTCGT
ATATTATTCCGTGTATCTTTTTTCTTCTTAGTTTAATATGCATATTTTATATATTTAAAGTCAACCTAAGAAAAGATAGC
GTCTCAGCGTATATTCTTATTTGCTTTTTACTGTGTATTTCTATTGCATACTTAAGCGCAGGAGGGGTTACAAGAGGTTA
TCGTATTAATAGGTACATTAATCTTTACACCTTTTTAGCTGTGCCTGTTTTATATCTAAATTTCTTGCATCAATATTTCA
AAGAACTTAAAGTGAAATTTTCGAGAGGAATTTACGTTGGTTTATTGTACCTTCTTCCTCTAATTAATATCCTGCTTGAA
TTATTTAGAGATAGAATAGGTCATCATTTAATTGTAAGCCTTAACCTTTTAACATTTTTATTAGAAATGATTGTAGTTTA
TGTTAGTCTCATATTATATCAAATAAAACATAGAAAAAAGGATTTCTCTTACCTGTTAAAAGTACTTCTGGTTTCTAATA
CAATTGCTTTTTTACCCTTTTCTTTATTATATATTGCTCCATTGATTATTTTTGGACAATATGTATATAGCGCTGTAGTT
ACTGCACCTTTTCTTCTGCTCATACCTTTAGCATTGGTATATCAATTTGTCGTAAATAAGATTTACAACATTGATTTCTT
GTTAGGCCGTTTGAGGTATTATTGCTTGTTAGCAGTTATTCCGACGATAGGAATCGTTTGGGTATTTGTAGTATTCATCA
ACAAAAATAAAAATTTTGACACTTTCCAAATTACATTGTTTGTATTTCTAATCATGCTAGCCGTTTTTTATTTCAAAGAA
GTTCTAGACTTTAAGTTTCGCTTAAAGCGTTTCTCTGAAAAATACAATTACCAAGACAGCATATTTAAATATACACAGCT
TCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAAAAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAG
CTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTGATAAACAGAACAGTGAACCGAACTGGCAGCCGTAT
AAAAAAGAATTTGATAAAGTCACATCAGAGATTGGCAAGATTATTGAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGA
AAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAATACTCCAAGACTGACAAGAGATGAGATATCTTGGT
TAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATATTGCAGATCGAAGAACTCATGAACCATTTACAAGAT
CTAAAGCAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGC
CCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGA
AAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGTCGGATGTCATTTTGATGACC
CGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCGGTGTCCAAGCTTACCGCACA
GCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCTGGATTTGGATACACAGCTGA
ATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATC
AGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGATGCAATCAGGAAGAAGGCGGCGGGCAGTCGAT
GAGCATGGGTCTTTCGGGTATTAAGGAGCGTGTCCGGGCGCTTGACGGACGGATGAAAATCGACACAAGTGAAGGAAACG
GTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(583-652)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

61.219

98.467

0.603


Multiple sequence alignment