Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   SAT0131_RS10885 Genome accession   NC_017347
Coordinates   2144670..2145386 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   P0A0I7
Organism   Staphylococcus aureus subsp. aureus T0131     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2139670..2150386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAT0131_RS16115 (SAT0131_02182) - 2140926..2141060 (-) 135 WP_001549197.1 delta-lysin family phenol-soluble modulin -
  SAT0131_RS10865 (SAT0131_02183) agrB 2141296..2141865 (+) 570 WP_001105707.1 accessory gene regulator AgrB -
  SAT0131_RS10870 (SAT0131_02184) - 2141862..2142002 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide -
  SAT0131_RS10875 (SAT0131_02187) - 2142633..2143805 (+) 1173 WP_000195430.1 IS256-like element IS256 family transposase -
  SAT0131_RS10880 (SAT0131_02188) - 2143902..2144651 (+) 750 Protein_2081 GHKL domain-containing protein -
  SAT0131_RS10885 (SAT0131_02189) agrA 2144670..2145386 (+) 717 WP_000688492.1 LytTR family DNA-binding domain-containing protein Regulator
  SAT0131_RS10890 - 2145458..2145565 (+) 108 WP_001790167.1 hypothetical protein -
  SAT0131_RS10895 (SAT0131_02190) - 2145753..2146712 (-) 960 WP_001253312.1 carbohydrate kinase -
  SAT0131_RS10900 (SAT0131_02191) - 2146709..2148193 (-) 1485 WP_000141417.1 sucrose-6-phosphate hydrolase -
  SAT0131_RS10905 (SAT0131_02192) - 2148342..2149292 (-) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=37308 SAT0131_RS10885 WP_000688492.1 2144670..2145386(+) (agrA) [Staphylococcus aureus subsp. aureus T0131]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=37308 SAT0131_RS10885 WP_000688492.1 2144670..2145386(+) (agrA) [Staphylococcus aureus subsp. aureus T0131]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 3BS1
  PDB 4G4K

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment